RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 UROC1Q96N76 676 aa11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 TRIM55Q9BYV6 548 aa11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 DMAP1Q9NPF5 467 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 TMLHEQ9NVH6 421 aa11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-204ENST00000538177 KCNK1O00180 336 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 HGSO14964 777 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SKIP12755 728 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 MX2P20592 715 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 CRADDP78560 199 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 GALNT2Q10471 571 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 CRYMQ14894 314 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 CASC4Q6P4E1 433 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 LRRTM3Q86VH5 581 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TRIM42Q8IWZ5 723 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 RFWD2Q8NHY2 731 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 HDAC11Q96DB2 347 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 EPAS1Q99814 870 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TKTL2Q9H0I9 626 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 OR12D3Q9UGF7 316 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 CHUKO15111 745 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 INPPL1O15357 1258 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 AP2A1O95782 977 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 IGLV3-25P01717 112 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 PRKCZQ05513 592 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 OVGP1Q12889 678 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 EIF4EBP2Q13542 120 aaPredicted RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 MAPRE1Q15691 268 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 STXBP5Q5T5C0 1151 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TAC4Q86UU9 113 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 UNC5BQ8IZJ1 945 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 NDUFAF2Q8N183 169 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 OR10T2Q8NGX3 314 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 ACMSDQ8TDX5 336 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 CDKL2Q92772 493 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SUSD3Q96L08 255 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SLC13A1Q9BZW2 595 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SYBUQ9NX95 663 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SIRPGQ9P1W8 387 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TRHDEQ9UKU6 1024 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 TRIM33Q9UPN9 1127 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 SQORQ9Y6N5 450 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 PCNTO95613 3336 aa11.72□□□□□ -0.53
SLC28A1-204ENST00000538177 ARHGEF37A1IGU5 675 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 ERI2A8K979 691 aaKnown RBP11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 LRIG2O94898 1065 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 ATP6V1G2O95670 118 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 T-ENOLP0DO92 83 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 NEFHP12036 1026 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 TYMPP19971 482 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 SERPINB6P35237 376 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 MNAT1P51948 309 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 OVOS1Q6IE37 1185 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 PACS1Q6VY07 963 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 KIF2BQ8N4N8 673 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 DQX1Q8TE96 717 aaKnown RBP11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 DPF3Q92784 378 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 TMEM209Q96SK2 561 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 VAT1Q99536 393 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 GBA3Q9H227 469 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 PIH1D1Q9NWS0 290 aaKnown RBP11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 DCTN4Q9UJW0 460 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 SNX10Q9Y5X0 201 aa11.71□□□□□ -0.53
SLC28A1-204ENST00000538177 BIRC5O15392 142 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 ZBTB24O43167 697 aaPredicted RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 KRT16P08779 473 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 DLDP09622 509 aaKnown RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 EPHB2P29323 1055 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 CYP2C18P33260 490 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 CD68P34810 354 aaPredicted RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 GARSP41250 739 aaKnown RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 TSPY1Q01534 308 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 TEX44Q53QW1 395 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 SPANXN3Q5MJ09 141 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 ICE2Q659A1 982 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 PCSK9Q8NBP7 692 aaKnown RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 CASS4Q9NQ75 786 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 SAR1AQ9NR31 198 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 PCMTD2Q9NV79 361 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms