RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 APOL1O14791 398 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ADH1CP00326 375 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 KRT7P08729 469 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 PRLRP16471 622 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CREMQ03060 361 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 AUHQ13825 339 aaKnown RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 GEN1Q17RS7 908 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 NUGGCQ68CJ6 796 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 TSTD1Q8NFU3 115 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ZSWIM1Q9BR11 485 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 OSBPL8Q9BZF1 889 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CNGB3Q9NQW8 809 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 IMPACTQ9P2X3 320 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 TBK1Q9UHD2 729 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CYTH4Q9UIA0 394 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 DERAQ9Y315 318 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 KIAA1551Q9HCM1 1747 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 A0A0D9SEW6 157 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 POC1B-GALNT4F8VUJ3 575 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ABLIM1O14639 778 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 LRIG2O94898 1065 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 NFATC1O95644 943 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 WARSP23381 471 aaKnown RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 SLCO1A2P46721 670 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CRADDP78560 199 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 GUCY2DQ02846 1103 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 GPS1Q13098 491 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 MAMLD1Q13495 774 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 NAB2Q15742 525 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 SNAP47Q5SQN1 464 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ANKS1BQ7Z6G8 1248 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 FAM160A2Q8N612 972 aaPredicted RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 ALLCQ8N6M5 410 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 RAPGEF5Q92565 580 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 LRRC45Q96CN5 670 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 TSGA10Q9BZW7 698 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 FAM107BQ9H098 131 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 RABEP2Q9H5N1 569 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.45□□□□□ -1.22
MSH6-209ENST00000538136 SAMD15Q9P1V8 674 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 WDR35Q9P2L0 1181 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 AMACRQ9UHK6 382 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CDH7Q9ULB5 785 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CYP8B1Q9UNU6 501 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ZKSCAN5Q9Y2L8 839 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 MEI4A8MW99 385 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FBXO21O94952 628 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ZSCAN5DPP0CG00 497 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FGFR3P22607 806 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 TAS2R40P59535 323 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 LAYNQ6UX15 382 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 C14orf80Q86SX3 495 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 TP53INP2Q8IXH6 220 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 C12orf56Q8IXR9 622 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 GSPT2Q8IYD1 628 aaKnown RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 HSFY1Q96LI6 401 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 RSPH14Q9UHP6 348 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ANAPC5Q9UJX4 755 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 MFHAS1Q9Y4C4 1052 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FASNP49327 2511 aaKnown RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 EFCAB8A8MWE9 144 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 MEFVO15553 781 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 F7P08709 466 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 HOXB2P14652 356 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 HOXC13P31276 330 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ACVRL1P37023 503 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 GRAMD4Q6IC98 578 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 IRF2BP2Q7Z5L9 587 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 IFNLR1Q8IU57 520 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ZMIZ2Q8NF64 920 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ACTL9Q8TC94 416 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FNIP1Q8TF40 1166 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 SAMD11Q96NU1 681 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 AKAP6Q13023 2319 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 KIF13BQ9NQT8 1826 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 KIAA1217Q5T5P2 1943 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 SLC9A3R1O14745 358 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 OAZ2O95190 189 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 KLF8O95600 359 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 SLC2A3P11169 496 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 VAV1P15498 845 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 GLDCP23378 1020 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 MATKP42679 507 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 GBE1Q04446 702 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 EML3Q32P44 896 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 RETSATQ6NUM9 610 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FBXL22Q6P050 247 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 DET1Q7L5Y6 550 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 WHAMMQ8TF30 809 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 FAM3CQ92520 227 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 BAP1Q92560 729 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 SPATA17Q96L03 361 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 ACOX2Q99424 681 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 CATSPERBQ9H7T0 1116 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms