RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PABPC1P11940 636 aaKnown RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 SKILP12757 684 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 HOXB2P14652 356 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 NDUFV2P19404 249 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 CCR1P32246 355 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 RFC1P35251 1148 aaPredicted RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 P2RY2P41231 377 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 PRKCIP41743 596 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 COPAP53621 1224 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 HDAC4P56524 1084 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 GSCP56915 257 aaPredicted RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 RPL7AP62424 266 aaKnown RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 OGDHQ02218 1023 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 CCDC6Q16204 474 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 ALFQ53S48 1182 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 MBLAC2Q68D91 279 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 PRR23BQ6ZRT6 265 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 CHST9Q7L1S5 443 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 ANKS1BQ7Z6G8 1248 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 CHPFQ8IZ52 775 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 APCDD1Q8J025 514 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 HJURPQ8NCD3 748 aaPredicted RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 ANKRD20A12PQ8NF67 263 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 HMGB4Q8WW32 186 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 MRGPRX1Q96LB2 322 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 TRIM7Q9C029 511 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 TKTL2Q9H0I9 626 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 PDCL3Q9H2J4 239 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 HAUS4Q9H6D7 363 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 SYNCQ9H7C4 482 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 METTL5Q9NRN9 209 aaKnown RBP8.69□□□□□ -1.02
SPARC-208ENST00000538026 RXFP3Q9NSD7 469 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 IFNKQ9P0W0 207 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 GGA2Q9UJY4 613 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 VANGL2Q9ULK5 521 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 MYO6Q9UM54 1294 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 NEU3Q9UQ49 428 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 CEP83Q9Y592 693 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 ADAMTS9Q9P2N4 1935 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 AKAP13Q12802 2813 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 ZZEF1O43149 2961 aa8.69□□□□□ -1.02
SPARC-208ENST00000538026 CHD8Q9HCK8 2581 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CEP295Q9C0D2 2601 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 DMXL2Q8TDJ6 3036 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ZFHX4Q86UP3 3567 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 SIGLEC16A6NMB1 481 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 DRGXA6NNA5 263 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 FAM72CH0Y354 149 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 LUC7L3O95232 432 aaKnown RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 CYBBP04839 570 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 PLEKP08567 350 aaPredicted RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 FERP16591 822 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 RRM1P23921 792 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CSKP41240 450 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 SULT1E1P49888 294 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 UBASH3AP57075 661 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ZNF445P59923 1031 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ATP11AP98196 1134 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 SKOR2Q2VWA4 1001 aaPredicted RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 PREPLQ4J6C6 727 aaPredicted RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 FIGNQ5HY92 759 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 FAM72AQ5TYM5 149 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 LAIR1Q6GTX8 287 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ACAD10Q6JQN1 1059 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 FAM72DQ6L9T8 149 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 WDR59Q6PJI9 974 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 TRIM72Q6ZMU5 477 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CACNA2D4Q7Z3S7 1137 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CHSY1Q86X52 802 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 FAM72BQ86X60 149 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 KIAA2013Q8IYS2 634 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 MCOLN2Q8IZK6 566 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CCAR2Q8N163 923 aaKnown RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 CARNMT1Q8N4J0 409 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ARFGAP1Q8N6T3 406 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CCDC26Q8TAB7 109 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 TRIM62Q9BVG3 475 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 CIPCQ9C0C6 399 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 SMOC1Q9H4F8 434 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 ADAM22Q9P0K1 906 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 SLCO3A1Q9UIG8 710 aa8.68□□□□□ -1.02
SPARC-208ENST00000538026 NYNRINQ9P2P1 1898 aaKnown RBP8.68□□□□□ -1.02
SPARC-208ENST00000538026 IGLV3-10A0A075B6K4 115 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 IGHV1OR15-9A0A0B4J2B8 117 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 TMCO5BA8MYB1 307 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 RNF103O00237 685 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 TIMM44O43615 452 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 EPN2O95208 641 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 SERPINC1P01008 464 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 APOEP02649 317 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 GYPCP04921 128 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 RETP07949 1114 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 DLDP09622 509 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 TPRP12270 2363 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 PDGFRAP16234 1089 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 GBP1P32455 592 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms