RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 VPS45Q9NRW7 570 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NOCTQ9UK39 431 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LUC7L2Q9Y383 392 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ASCC3Q8N3C0 2202 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SYNJ2BP-COX16A0A087WUM0 186 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 IGHV1OR15-9A0A0B4J2B8 117 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TYW5A2RUC4 315 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LRRC53A6NM62 1247 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TACR2P21452 398 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NOS2P35228 1153 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DHPSP49366 369 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ATXN1P54253 815 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NOMO3P69849 1222 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZBED6P86452 979 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LMAN2Q12907 356 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 E2F5Q15329 346 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PTPRNQ16849 979 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 C2CD6Q53TS8 623 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 OTUD1Q5VV17 481 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MBLAC2Q68D91 279 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TCEAL6Q6IPX3 200 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SERPINA13PQ6UXR4 307 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CHSY1Q86X52 802 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 XYLT1Q86Y38 959 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LGI2Q8N0V4 545 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ATP6V0D2Q8N8Y2 350 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NETO1Q8TDF5 533 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLC20A1Q8WUM9 679 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TCEAL3Q969E4 200 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 C18orf8Q96DM3 657 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PRMT1Q99873 361 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TMEM245Q9H330 911 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 COX16Q9P0S2 106 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MAP3K13O43283 966 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZNF217O75362 1048 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LSM8O95777 96 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 HLA-EP13747 358 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FERP16591 822 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CASP14P31944 242 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CCR1P32246 355 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PTGER3P43115 390 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 COPAP53621 1224 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ARID5AQ03989 594 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GSE1Q14687 1217 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FSCBQ5H9T9 825 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SFMBT2Q5VUG0 894 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LPCAT2Q7L5N7 544 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ERMP1Q7Z2K6 904 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ERICH1Q86X53 443 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZNF677Q86XU0 584 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DRC7Q8IY82 874 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CARNMT1Q8N4J0 409 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZNF557Q8N988 423 aaPredicted RBP18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NPY6RQ99463 290 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 INTS6Q9UL03 887 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CYP8B1Q9UNU6 501 aa18.48■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LUC7L3O95232 432 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 EPHX1P07099 455 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLC2A3P11169 496 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CHRNB2P17787 502 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TFE3P19532 575 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SDHBP21912 280 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SCNN1AP37088 669 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MATKP42679 507 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FMO1Q01740 532 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 AASDHQ4L235 1098 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SPDYCQ5MJ68 293 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 KIAA1324Q6UXG2 1013 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MMS22LQ6ZRQ5 1243 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ARMCX6Q7L4S7 300 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DGLUCYQ7Z3D6 616 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CYP2U1Q7Z449 544 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZNF366Q8N895 744 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 C12orf50Q8NA57 414 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CPA5Q8WXQ8 436 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NT5C3BQ969T7 300 aa18.47■□□□□ 0.55
TNFRSF1A-209ENST00000536717 M0QYT0 321 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLC30A4O14863 429 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SYNCRIPO60506 623 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CYP1A1P04798 512 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DLDP09622 509 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ABCB4P21439 1286 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CDC25BP30305 580 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RNASE9P60153 205 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CDR2Q01850 454 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RPL6Q02878 288 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NME3Q13232 169 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CDH18Q13634 790 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ASIC2Q16515 512 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLC36A4Q6YBV0 504 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 METTL3Q86U44 580 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TMPRSS6Q8IU80 811 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TTC17Q96AE7 1141 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MYO19Q96H55 970 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RTKNQ9BST9 563 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PRDM16Q9HAZ2 1276 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms