RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 BCLAF3A2AJT9 711 aaKnown RBP14.75□□□□□ -0.05
UBE3B-206ENST00000536398 F5H5T6 163 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 NPC1O15118 1278 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 PAGE1O75459 146 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 EPHX1P07099 455 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 SLC2A3P11169 496 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 UNGP13051 313 aaPredicted RBP14.75□□□□□ -0.05
UBE3B-206ENST00000536398 POLR2EP19388 210 aaKnown RBP14.75□□□□□ -0.05
UBE3B-206ENST00000536398 MMP8P22894 467 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CSKP41240 450 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 PTGER3P43115 390 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 DHPSP49366 369 aaPredicted RBP14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CXCR3P49682 368 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 COPAP53621 1224 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CENPCQ03188 943 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CDH18Q13634 790 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 STARD3Q14849 445 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 LUZP1Q86V48 1076 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CACUL1Q86Y37 369 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 TMPRSS6Q8IU80 811 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 APCDD1Q8J025 514 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 EMC1Q8N766 993 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 TTC17Q96AE7 1141 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 SPACA7Q96KW9 195 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 CFAP57Q96MR6 1250 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 C11orf70Q9BRQ4 267 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 TKTL2Q9H0I9 626 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 TMEM245Q9H330 911 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
UBE3B-206ENST00000536398 VANGL2Q9ULK5 521 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 PLA2G4CQ9UP65 541 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 DAAM1Q9Y4D1 1078 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 SPTBN4Q9H254 2564 aa14.75□□□□□ -0.05
UBE3B-206ENST00000536398 LAMA1P25391 3075 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 TYW5A2RUC4 315 aaKnown RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PATE3B3GLJ2 98 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 H0Y626 953 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 ZBTB24O43167 697 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 SYNCRIPO60506 623 aaKnown RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 CAVIN2O95810 425 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 DLDP09622 509 aaKnown RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 ZNF806P0C7X5 589 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 SCNN1AP37088 669 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 LMNB2Q03252 620 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PTP4A2Q12974 167 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 CLEC16AQ2KHT3 1053 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 SLC25A52Q3SY17 297 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PITRM1Q5JRX3 1037 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 LPCAT2Q7L5N7 544 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 IRF2BP2Q7Z5L9 587 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 C11orf74Q86VG3 221 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 BAP1Q92560 729 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PIGKQ92643 395 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 MYO19Q96H55 970 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 MRGPRX3Q96LB0 322 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 RPRD1AQ96P16 312 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 AGPAT1Q99943 283 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 SIK2Q9H0K1 926 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 WDCPQ9H6R7 721 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PRDM16Q9HAZ2 1276 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 TMEM74BQ9NUR3 256 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 SEPT11Q9NVA2 429 aaKnown RBP14.74□□□□□ -0.05
UBE3B-206ENST00000536398 ARHGEF38Q9NXL2 777 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 DLL3Q9NYJ7 618 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 PCDHGA5Q9Y5G8 931 aa14.74□□□□□ -0.05
UBE3B-206ENST00000536398 THADAQ6YHU6 1953 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 A0A1B0GTH6 734 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 CNTN5O94779 1100 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 ATP5BP06576 529 aaKnown RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 PDGFRAP16234 1089 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 MZF1P28698 734 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 RPL6Q02878 288 aaKnown RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 DEUP1Q05D60 604 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 BYSLQ13895 437 aaKnown RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 ARTNQ5T4W7 220 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 SH3PXD2AQ5TCZ1 1133 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 CXorf57Q6NSI4 855 aaKnown RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 BNIPLQ7Z465 357 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 MSANTD4Q8NCY6 345 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 OR52K2Q8NGK3 314 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 PGAP3Q96FM1 320 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-206ENST00000536398 PRSS16Q9NQE7 514 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 VPS45Q9NRW7 570 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 RRN3Q9NYV6 651 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 SLCO3A1Q9UIG8 710 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 STAP1Q9ULZ2 295 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 CEP250Q9BV73 2442 aa14.73□□□□□ -0.05
UBE3B-206ENST00000536398 ATXN2Q99700 1313 aaKnown RBP14.72□□□□□ -0.05
UBE3B-206ENST00000536398 RALGAPA1Q6GYQ0 2036 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 PRR5-ARHGAP8B1AHC4 643 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 ZNF217O75362 1048 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 ITPKAP23677 461 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 ARHGAP8P85298 464 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 ATP11AP98196 1134 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 CAMK2GQ13555 558 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-206ENST00000536398 NR1I3Q14994 352 aa14.72□□□□□ -0.05
UBE3B-206ENST00000536398 C15orf59Q2T9L4 293 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms