RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 M0QYT0 321 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 CREB3O43889 395 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 MYL4P12829 197 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 NPR3P17342 541 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 TKTP29401 623 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 TYK2P29597 1187 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 GARSP41250 739 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 AIF1P55008 147 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 ACTR3P61158 418 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 TUBB3Q13509 450 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 DPYSQ14117 519 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PCLAFQ15004 111 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 USP50Q70EL3 339 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 ULK2Q8IYT8 1036 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 DTX3LQ8TDB6 740 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 WNT8BQ93098 351 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM136AQ96C01 138 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 THTPAQ9BU02 230 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 SEPT10Q9P0V9 454 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 SLC17A6Q9P2U8 582 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 SOX13Q9UN79 622 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 RAD54BQ9Y620 910 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 RPS6KL1Q9Y6S9 549 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PDHXO00330 501 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 PROCP04070 461 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 CYP2C9P11712 490 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 CDK7P50613 346 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 RFX8Q6ZV50 586 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 CERS2Q96G23 380 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 MAML3Q96JK9 1138 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 ZNF778Q96MU6 729 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 SLC2A13Q96QE2 648 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 TINF2Q9BSI4 451 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 CEP41Q9BYV8 373 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 LRRC4Q9HBW1 653 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 COPG2Q9UBF2 871 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 PIN4Q9Y237 131 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 EEF2KO00418 725 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 DCLK1O15075 740 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 NCAM2O15394 837 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 LYPLA1O75608 230 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 SMIM10L2AP0DMW4 78 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 SMIM10L2BP0DMW5 78 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 ERVK-10P10266 1014 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 MX2P20592 715 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 PITX1P78337 314 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 DEUP1Q05D60 604 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 UBAP2LQ14157 1087 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 CCDC153Q494R4 210 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 LRRC40Q9H9A6 602 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 TMPRSS4Q9NRS4 437 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 SLC7A8Q9UHI5 535 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 ADAM28Q9UKQ2 775 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 ANGPTL2Q9UKU9 493 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
CHMP1A-202ENST00000535997 PDCD11Q14690 1871 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PRKCGP05129 697 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 ADRA1BP35368 520 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 CPOXP36551 454 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 MLH1P40692 756 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 MXRA7P84157 204 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 RABGAP1LQ5R372 815 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SYPL2Q5VXT5 272 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 RASSF3Q86WH2 238 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SIX6OS1Q8N1H7 587 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 ISL2Q96A47 359 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 TMEM216Q9P0N5 145 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 MAP3K7O43318 606 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 BEST1O76090 585 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PDHA1P08559 390 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 RALBP11234 206 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 ALOX15P16050 662 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SPRP35270 261 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 HCAR3P49019 387 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 HARS2P49590 506 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 NDUFV1P49821 464 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 NME3Q13232 169 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PPM1JQ5JR12 505 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 RIPOR1Q6ZS17 1223 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PAQR9Q6ZVX9 377 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 TMEM135Q86UB9 458 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 MYLK4Q86YV6 388 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms