RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 TBCBQ99426 244 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 CHP1Q99653 195 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 DDX50Q9BQ39 737 aaKnown RBP13.14□□□□□ -0.31
DDB1-207ENST00000535967 LINC00597Q9H2U6 94 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
DDB1-207ENST00000535967 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 CHURC1-FNTBB4DL54 471 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 SCAMP3O14828 347 aaKnown RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 ACSL4O60488 711 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ENDOD1O94919 500 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ABCB4P21439 1286 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 GJA4P35212 333 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 FNTBP49356 437 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CXCR3P49682 368 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 GSDMDP57764 484 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 GAD2Q05329 585 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 NME3Q13232 169 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 MAMLD1Q13495 774 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 PPM1JQ5JR12 505 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 LY6G5CQ5SRR4 150 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ADGRF1Q5T601 910 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CCDC170Q8IYT3 715 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 FNIP1Q8TF40 1166 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 PIGVQ9NUD9 493 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 FAM208BQ5VWN6 2430 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 LAMA1P25391 3075 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 SYNJ2BP-COX16A0A087WUM0 186 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 OTOL1A6NHN0 477 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 SLC30A4O14863 429 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CYBBP04839 570 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 CCR3P51677 355 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 CCDC14Q49A88 953 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 PHLDB2Q86SQ0 1253 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 TMTC1Q8IUR5 882 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 SPC24Q8NBT2 197 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 CENPIQ92674 756 aaPredicted RBP13.13□□□□□ -0.31
DDB1-207ENST00000535967 RNF34Q969K3 372 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 CNPY3Q9BT09 278 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 SEMA4GQ9NTN9 838 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 COX16Q9P0S2 106 aa13.13□□□□□ -0.31
DDB1-207ENST00000535967 EML5Q05BV3 1969 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 TYW5A2RUC4 315 aaKnown RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 TMEM191CA6NGB0 347 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 KCNU1A8MYU2 1149 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 K7ESF4 209 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 GFRA2O00451 464 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 CCP110O43303 1012 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 CACNG3O60359 315 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 LCA5LO95447 670 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 GJB6O95452 261 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 MOCS2O96007 188 aaPredicted RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 CYP1A2P05177 515 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 RETP07949 1114 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 TFE3P19532 575 aaPredicted RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 CXCL12P48061 93 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 GALCP54803 685 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 NRLP54845 237 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 RPL7AP62424 266 aaKnown RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 ATP11AP98196 1134 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 PREPLQ4J6C6 727 aaPredicted RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 HEATR6Q6AI08 1181 aaKnown RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 FAM172AQ8WUF8 416 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 WDCPQ9H6R7 721 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
DDB1-207ENST00000535967 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 MYO1AQ9UBC5 1043 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
DDB1-207ENST00000535967 ATRXP46100 2492 aa13.11□□□□□ -0.31
DDB1-207ENST00000535967 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms