RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MLNP12872 115 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 YY1P25490 414 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 SESN2P58004 480 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-202ENST00000535906 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 PM20D1Q6GTS8 502 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 PID1Q7Z2X4 250 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 CHSY1Q86X52 802 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 METTL23Q86XA0 190 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 ARNTL2Q8WYA1 636 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 SRPK1Q96SB4 655 aaKnown RBP13.74□□□□□ -0.21
VPS33B-202ENST00000535906 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 SDR42E2A6NKP2 422 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 WFS1O76024 890 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 MGAT1P26572 445 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 CXCR3P49682 368 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 RASSF2P50749 326 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 GRIK3Q13003 919 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 TUSC3Q13454 348 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 OLIG2Q13516 323 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 TTC17Q96AE7 1141 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 FERMT1Q9BQL6 677 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
VPS33B-202ENST00000535906 OR12D3Q9UGF7 316 aa13.74□□□□□ -0.21
VPS33B-202ENST00000535906 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-202ENST00000535906 COPEO14579 308 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ANP32DO95626 131 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 F9P00740 461 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 HCAR3P49019 387 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 OVGP1Q12889 678 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TRIM71Q2Q1W2 868 aaKnown RBP13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ARL13BQ3SXY8 428 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ACCSLQ4AC99 568 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 LGSNQ5TDP6 509 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 STEAP4Q687X5 459 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TAC4Q86UU9 113 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 DEPDC1BQ8WUY9 529 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 SLC7A6OSQ96CW6 309 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-202ENST00000535906 GORASP1Q9BQQ3 440 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 DMAP1Q9NPF5 467 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-202ENST00000535906 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 NOP53Q9NZM5 478 aaKnown RBP13.73□□□□□ -0.21
VPS33B-202ENST00000535906 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 SLC17A6Q9P2U8 582 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ZFP69BQ9UJL9 534 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 KRT38O76015 456 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 ALDH1A2O94788 518 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 PTPN3P26045 913 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TAF1BQ53T94 588 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-202ENST00000535906 OVOS1Q6IE37 1185 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TLDC1Q6P9B6 456 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 CYS1Q717R9 158 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TSSK1BQ9BXA7 367 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 TRIM55Q9BYV6 548 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
VPS33B-202ENST00000535906 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 B4GALT3O60512 393 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 LRIG2O94898 1065 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 CST5P28325 142 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 IFRD2Q12894 506 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 MTDHQ86UE4 582 aaKnown RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 ZNF598Q86UK7 904 aaKnown RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 IRGQQ8WZA9 623 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 MYCBPQ99417 103 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 KLHL8Q9P2G9 620 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 C15orf41Q9Y2V0 281 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 TTC3P53804 2025 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 TGDSO95455 350 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 CBX6O95503 412 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 BGNP21810 368 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 EPHB2P29323 1055 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 CCNFP41002 786 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 SERPINB4P48594 390 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 CLNKQ7Z7G1 428 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 MTBPQ96DY7 904 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 IQCGQ9H095 443 aaKnown RBP13.72□□□□□ -0.21
VPS33B-202ENST00000535906 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
VPS33B-202ENST00000535906 DCTN4Q9UJW0 460 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms