RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HECTD2Q5U5R9 776 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 VPS53Q5VIR6 699 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 SUMO4Q6EEV6 95 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CRIP3Q6Q6R5 217 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 KIAA0408Q6ZU52 694 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 PTCHD4Q6ZW05 846 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 RAB11FIP2Q7L804 512 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 P3H2Q8IVL5 708 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 FAM71DQ8N9W8 422 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NEU4Q8WWR8 484 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ASB10Q8WXI3 467 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CPT1BQ92523 772 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 LPIN2Q92539 896 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 HAPLN3Q96S86 360 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 SEPSECSQ9HD40 501 aaKnown RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ALG13Q9NP73 1137 aaKnown RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 SERTAD4Q9NUC0 356 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 LRFN1Q9P244 771 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 BAG5Q9UL15 447 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NIP7Q9Y221 180 aaKnown RBP eCLIP3.73□□□□□ -1.814e-44■■■■■ 26.8
SNHG1-202ENST00000535689 UBE2J1Q9Y385 318 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 DTNAQ9Y4J8 743 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ADAMTS7Q9UKP4 1686 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ADGRA2Q96PE1 1338 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 MANSC4A6NHS7 340 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ERVV-1B6SEH8 477 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 BTBD19C9JJ37 291 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SEPT4O43236 478 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 NARSO43776 548 aaKnown RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 PMPCBO75439 489 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 JTBO76095 146 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 WDR47O94967 919 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 NDST3O95803 873 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CSF1RP07333 972 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 C6P13671 934 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SERPINB3P29508 390 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 TNNT2P45379 298 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 GMPSP49915 693 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CCT8P50990 548 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 PAPOLAP51003 745 aaKnown RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SEC24CP53992 1094 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ELLP55199 621 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ARL4CP56559 192 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 EEFSECP57772 596 aaKnown RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SEMA3BQ13214 749 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SLC39A6Q13433 755 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 TRIM14Q14142 442 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SLC4A8Q2Y0W8 1093 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 P3H1Q32P28 736 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CERKLQ49MI3 558 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 FAM83BQ5T0W9 1011 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 STRIP1Q5VSL9 837 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SLC9A4Q6AI14 798 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SULT6B1Q6IMI4 303 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ZNF790Q6PG37 636 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 VSTM1Q6UX27 236 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CLEC9AQ6UXN8 241 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 Q6YL49 198 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ARMC9Q7Z3E5 817 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 GALNT15Q8N3T1 639 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SLC44A3Q8N4M1 653 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 PNPLA1Q8N8W4 532 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 GLIS1Q8NBF1 620 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 ADPRHL1Q8NDY3 354 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SUN3Q8TAQ9 357 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 EYA3Q99504 573 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 TP63Q9H3D4 680 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-202ENST00000535689 FBXO28Q9NVF7 368 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CDC23Q9UJX2 597 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 SUFUQ9UMX1 484 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 GABRQQ9UN88 632 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 TRIM17Q9Y577 477 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 INSL6Q9Y581 213 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 NPC1L1Q9UHC9 1359 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 NUP98P52948 1817 aa3.72□□□□□ -1.81
SNHG1-202ENST00000535689 CEP290O15078 2479 aa3.71□□□□□ -1.81
SNHG1-202ENST00000535689 BCORQ6W2J9 1755 aa3.71□□□□□ -1.81
SNHG1-202ENST00000535689 LOC102724159A0A0B4J2E5 919 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 WDR27A2RRH5 827 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 C3orf70A6NLC5 250 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PIP5K1BO14986 540 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 MATN3O15232 486 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 CAMTA2O94983 1202 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 FESP07332 822 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 IL6RP08887 468 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 TNNT1P13805 278 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 GPD1P21695 349 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 MST1P26927 711 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ADORA2AP29274 412 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 SERPINF1P36955 418 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PCP4P48539 62 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 RARRES1P49788 294 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PRMT2P55345 433 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 AP2B1P63010 937 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 DPTQ07507 201 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 CCDC15Q0P6D6 951 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PPFIA1Q13136 1202 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 EIF2B5Q13144 721 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms