RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TMA16Q96EY4 203 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC39A13Q96H72 371 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC4A5Q9BY07 1137 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 INTS2Q9H0H0 1204 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 MIR1-1HGQ9H1L0 117 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 CLMPQ9H6B4 373 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 WSB2Q9NYS7 404 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 CYTH4Q9UIA0 394 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 FNDC3AQ9Y2H6 1198 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 CABIN1Q9Y6J0 2220 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 KNL1Q8NG31 2342 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 SPTA1P02549 2419 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 CFAP46Q8IYW2 2715 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 A0A1B0GTW7 788 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 CAPN8A6NHC0 703 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 BECN2A8MW95 431 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 MEI4A8MW99 385 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 KCNJ18B7U540 433 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 PYCARD-AS1I3L0S3 204 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 PLK4O00444 970 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 FLRT2O43155 660 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 ACSL4O60488 711 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 DKK1O94907 266 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 IGLV3-19P01714 112 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 PRKCHP24723 683 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC6A4P31645 630 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 EIF2S3P41091 472 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 MATKP42679 507 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 ACADSBP45954 432 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 SEMG2Q02383 582 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 PIK3R6Q5UE93 754 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 NADSYN1Q6IA69 706 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 DPY19L2P1Q6NXN4 242 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 TRIM65Q6PJ69 517 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 ENOSF1Q7L5Y1 443 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 GPR155Q7Z3F1 870 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 TMEM110Q86TL2 294 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 ADIPOR2Q86V24 386 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 UNC45BQ8IWX7 931 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 ZCCHC9Q8N567 271 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 WFDC5Q8TCV5 224 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 WFIKKN2Q8TEU8 576 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 SORCS1Q8WY21 1168 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 FCRL2Q96LA5 508 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 TMEM245Q9H330 911 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 UBE2TQ9NPD8 197 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 NFE2L3Q9Y4A8 694 aa10.46□□□□□ -0.73
CLSTN3-203ENST00000534830 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 GOLGA6L7A0A1B0GV03 622 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 GTPBP10A4D1E9 387 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 IRAK2O43187 625 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 PAPSS1O43252 624 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 TSPAN3O60637 253 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 IGLV3-25P01717 112 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 ZNF883P0CG24 379 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 SLC9A1P19634 815 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 CD6P30203 668 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 TBX4P57082 545 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 KCNC4Q03721 635 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 CAMK2GQ13555 558 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 CAMK4Q16566 473 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 PTPRNQ16849 979 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 HLA-BQ31612 363 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 TAF1BQ53T94 588 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 NUGGCQ68CJ6 796 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 DENND1BQ6P3S1 775 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 RFWD3Q6PCD5 774 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 IL27RAQ6UWB1 636 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 KIAA1324Q6UXG2 1013 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 TMPRSS6Q8IU80 811 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 WDTC1Q8N5D0 677 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 BAHD1Q8TBE0 780 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 DQX1Q8TE96 717 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 DNASE2BQ8WZ79 361 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 NXPE2Q96DL1 559 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 MYEOVQ96EZ4 313 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 MYO19Q96H55 970 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 FAM81BQ96LP2 452 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 ACP6Q9NPH0 428 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 NAALADL1Q9UQQ1 740 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 TLR6Q9Y2C9 796 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 BTBD3Q9Y2F9 522 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 AK5Q9Y6K8 562 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 COL6A6A6NMZ7 2263 aa10.45□□□□□ -0.74
CLSTN3-203ENST00000534830 E9PAM4 449 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 BCAT2O15382 392 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 MED7O43513 233 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 TNFSF14O43557 240 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 TLX3O43711 291 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 PABPC1P11940 636 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 KRT5P13647 590 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 PON1P27169 355 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 OXTRP30559 389 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 GNA15P30679 374 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 CD70P32970 193 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SLC11A2P49281 568 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 TPMTP51580 245 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms