RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 C2orf71A6NGG8 1288 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 CBX4O00257 560 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 GPR182O15218 404 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 FAM155BO75949 473 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 LYPLA2O95372 231 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 DDX5P17844 614 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 IL10P22301 178 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 HOXD10P28358 340 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 HOXD13P35453 343 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 NNMTP40261 264 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 RGS2P41220 211 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 JAM2P57087 298 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 TUBA1BP68363 451 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 XRCC4Q13426 336 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 TUBA1AQ71U36 451 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 TNS4Q8IZW8 715 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 SPATA6LQ8N4H0 392 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 PCDHA2Q9Y5H9 948 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 NID2Q14112 1375 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 NUDT17P0C025 328 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ZNF143P52747 638 aaPredicted RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 ZNF470Q6ECI4 717 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 BBS12Q6ZW61 710 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 MAML3Q96JK9 1138 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ZFP42Q96MM3 310 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 SLC17A7Q9P2U7 560 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TMEM247A6NEH6 219 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TIMM44O43615 452 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 STRNO43815 780 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 C4BPAP04003 597 aaKnown RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 ITGB6P18564 788 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 EEF1DP29692 281 aaKnown RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 GP5P40197 560 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 GBE1Q04446 702 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 SEL1L3Q68CR1 1132 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 RASGEF1CQ8N431 466 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 CALML6Q8TD86 181 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TSPAN17Q96FV3 270 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TBCBQ99426 244 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TINF2Q9BSI4 451 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ADNPQ9H2P0 1102 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 CAAP1Q9H8G2 361 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 TMED5Q9Y3A6 229 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 TM9SF1O15321 606 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ZBTB24O43167 697 aaPredicted RBP12.5□□□□□ -0.41
BDNF-218ENST00000533246 MGEA5O60502 916 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 PIRTP0C851 137 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 CALB2P22676 271 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 WEE1P30291 646 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 ANKRD27Q96NW4 1050 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 SH3GL2Q99962 352 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 CRYL1Q9Y2S2 319 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 N6AMT1Q9Y5N5 214 aa12.5□□□□□ -0.41
BDNF-218ENST00000533246 SYCE1LA8MT33 242 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 A8MX80 341 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LRCH4O75427 683 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 PROCP04070 461 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 ERBB2P04626 1255 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 PTPN1P18031 435 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 SLC1A6P48664 564 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 ALDH7A1P49419 539 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 RABGGTBP53611 331 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 RAD51Q06609 339 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 BST1Q10588 318 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 SNX30Q5VWJ9 437 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 DEFB128Q7Z7B8 93 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 APOPT1Q96IL0 206 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 ADAM2Q99965 735 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 FRMD8P1Q9BZ68 369 aaPredicted RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 AKAP12Q02952 1782 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 TCRBV9S1A1TA0A576 114 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MAN1A2O60476 641 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LTFP02788 710 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms