RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 HNRNPA1L2Q32P51 320 aaKnown RBP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 MPP7Q5T2T1 576 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 ARHGAP40Q5TG30 622 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 PM20D1Q6GTS8 502 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 SND1Q7KZF4 910 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 MMAAQ8IVH4 418 aaKnown RBP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 CCDC117Q8IWD4 279 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 TTC39CQ8N584 583 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 OR14C36Q8NHC7 312 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 WFDC5Q8TCV5 224 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 LRRC4Q9HBW1 653 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 APOBEC3GQ9HC16 384 aaKnown RBP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
CTNND1-235ENST00000533189 TDRD6O60522 2096 aaKnown RBP11.1□□□□□ -0.63
CTNND1-235ENST00000533189 PTPN13Q12923 2485 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 DOCK9Q9BZ29 2069 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3DA0A087WVF3 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3IA0A087WXS9 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3EA0A087X179 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3KA0A087X1G2 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TARSL2A2RTX5 802 aaKnown RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TYW5A2RUC4 315 aaKnown RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3FA6NER0 549 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 B8ZZF3 427 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3LB9A6J9 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 PDXKO00764 312 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 WNT9AO14904 365 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ADH1BP00325 375 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3HP0C7X1 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 CSKP41240 450 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 GCLMP48507 274 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 PSMD8P48556 350 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 SGSHP51688 502 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 DAB2P98082 770 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 CUL4BQ13620 913 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ARHGAP17Q68EM7 881 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3GQ6DHY5 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3CQ6IPX1 549 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 MFN1Q8IWA4 741 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 UNC45BQ8IWX7 931 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TBC1D3Q8IZP1 549 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 LSMEM2Q8N112 164 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 FAM181AQ8N9Y4 354 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 MFSD2AQ8NA29 543 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ANKRD52Q8NB46 1076 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TAS1R2Q8TE23 839 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 NDRG1Q92597 394 aaKnown RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 EDEM1Q92611 657 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 TTC17Q96AE7 1141 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ZNF578Q96N58 590 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-235ENST00000533189 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 CPNE5Q9HCH3 593 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 EXOC1Q9NV70 894 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 STIM2Q9P246 746 aa11.09□□□□□ -0.63
CTNND1-235ENST00000533189 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 XPO1O14980 1071 aaKnown RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 IRAK2O43187 625 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 MSI1O43347 362 aaKnown RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 CALUO43852 315 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 TRIM49P0CI25 452 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 TRIM49CP0CI26 452 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 KRT13P13646 458 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 C6P13671 934 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 GOT1P17174 413 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 C5AR1P21730 350 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 SLC11A2P49281 568 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 ADPRHP54922 357 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 GABREP78334 506 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 ADIGQ0VDE8 80 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 STK4Q13043 487 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 LY6DQ14210 128 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 ARID5BQ14865 1188 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 C1orf220Q5T0J3 134 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 C9orf64Q5T6V5 341 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 ERICH6BQ5W0A0 696 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 RNF219Q5W0B1 726 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 BSPRYQ5W0U4 402 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 KANSL1Q7Z3B3 1105 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 PRPF39Q86UA1 669 aaKnown RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 IQCHQ86VS3 1027 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 SIX6OS1Q8N1H7 587 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 KDM1BQ8NB78 822 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 SLC4A11Q8NBS3 891 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 HJURPQ8NCD3 748 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-235ENST00000533189 KIAA0895Q8NCT3 520 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 FIBINQ8TAL6 211 aa11.08□□□□□ -0.64
CTNND1-235ENST00000533189 KCNE4Q8WWG9 221 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms