RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 BRMS1LQ5PSV4 323 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 CFAP58Q5T655 872 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 SYCE2Q6PIF2 218 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 EP400NLQ6ZTU2 488 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 ALLCQ8N6M5 410 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 LEMD2Q8NC56 503 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 SNF8Q96H20 258 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 KCTD15Q96SI1 283 aaPredicted RBP19.08■□□□□ 0.65
SMPD1-208ENST00000533123 MAK16Q9BXY0 300 aaKnown RBP19.08■□□□□ 0.65
SMPD1-208ENST00000533123 TXLNGYQ9BZA5 131 aa19.08■□□□□ 0.65
SMPD1-208ENST00000533123 C2orf16Q68DN1 1984 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 FGF19O95750 216 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 OLFM2O95897 454 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 CKMP06732 381 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 AIF1P55008 147 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 DLX2Q07687 328 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-208ENST00000533123 SCAPQ12770 1279 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 CALCOCO2Q13137 446 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 PDK2Q15119 407 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 HSP90B2PQ58FF3 399 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 GPR158Q5T848 1215 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 ALS2CLQ60I27 953 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 ANKRD54Q6NXT1 300 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 B4GALNT4Q76KP1 1039 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 PQLC3Q8N755 202 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 UBLCP1Q8WVY7 318 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-208ENST00000533123 RNF157Q96PX1 679 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 SIK2Q9H0K1 926 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 WHRNQ9P202 907 aa19.08■□□□□ 0.64
SMPD1-208ENST00000533123 HBS1LQ9Y450 684 aaKnown RBP19.08■□□□□ 0.64
SMPD1-208ENST00000533123 FAM72CH0Y354 149 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 APOC4-APOC2K7ER74 178 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 PPFIA2O75334 1257 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 PAGE1O75459 146 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 PAPLNO95428 1278 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 IGLV3-27P01718 113 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 APOC2P02655 101 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 ITGAVP06756 1048 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 SRGAP2BP0DMP2 458 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 ITGA8P53708 1063 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 COG7P83436 770 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 ZXDBP98169 803 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 ANKRD20A8PQ5CZ79 823 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 FAM72AQ5TYM5 149 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 FAM72DQ6L9T8 149 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 FAM72BQ86X60 149 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 MAP7D3Q8IWC1 876 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 PCDH19Q8TAB3 1148 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 ING5Q8WYH8 240 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 KLF16Q9BXK1 252 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-208ENST00000533123 MED4Q9NPJ6 270 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 CLEC1BQ9P126 229 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 PLAAQ9Y263 795 aa19.07■□□□□ 0.64
SMPD1-208ENST00000533123 DRG1Q9Y295 367 aaKnown RBP19.07■□□□□ 0.64
SMPD1-208ENST00000533123 MRPS23Q9Y3D9 190 aaKnown RBP19.07■□□□□ 0.64
SMPD1-208ENST00000533123 SGK1O00141 431 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 APOEP02649 317 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 IRF1P10914 325 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 SLC2A3P11169 496 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 POU3F3P20264 500 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 KPNA1P52294 538 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 GDF10P55107 478 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 LMNB2Q03252 620 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 RING1Q06587 406 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 PSTKQ8IV42 348 aaKnown RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 CCDC89Q8N998 374 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 TTC13Q8NBP0 860 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 TTC16Q8NEE8 873 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 ITFG1Q8TB96 612 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 ZFRQ96KR1 1074 aaKnown RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 SMG9Q9H0W8 520 aaKnown RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 CLDND1Q9NY35 253 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 OR12D3Q9UGF7 316 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 CPQQ9Y646 472 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 TRAV19A0A0A6YYK7 116 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 CREB3O43889 395 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 GYS2P54840 703 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 CBX2Q14781 532 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 UBAP2Q5T6F2 1119 aaKnown RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 GPR149Q86SP6 731 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 PLD5Q8N7P1 536 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 OR2W6PQ8NHA6 318 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 WBP2Q969T9 261 aa19.06■□□□□ 0.64
SMPD1-208ENST00000533123 MTRF1LQ9UGC7 380 aaKnown RBP19.06■□□□□ 0.64
SMPD1-208ENST00000533123 ZNF197O14709 1029 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 TBX10O75333 385 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 STC2O76061 302 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 IFNB1P01574 187 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 GOT1P17174 413 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 CEBPBP17676 345 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 ITIH2P19823 946 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 EIF3EP60228 445 aaKnown RBP19.05■□□□□ 0.64
SMPD1-208ENST00000533123 P3H1Q32P28 736 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 ARHGAP15Q53QZ3 475 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 RHBDF2Q6PJF5 856 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 POTEHQ6S545 545 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 FAM71BQ8TC56 605 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms