RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FAM102AQ5T9C2 384 aaPredicted RBP31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 NAA35Q5VZE5 725 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 TCEAL6Q6IPX3 200 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 ARMCX6Q7L4S7 300 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 TMPRSS6Q8IU80 811 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 TCEAL3Q969E4 200 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 TTC17Q96AE7 1141 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 NPY6RQ99463 290 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 STAP1Q9ULZ2 295 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 CACNA1AO00555 2505 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 MUC22E2RYF6 1773 aaPredicted RBP31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 H0Y626 953 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 SLC30A4O14863 429 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 COPAP53621 1224 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 C2CD6Q53TS8 623 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 FSCBQ5H9T9 825 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 OTUD1Q5VV17 481 aaPredicted RBP31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 PIGKQ92643 395 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 CD93Q9NPY3 652 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 RXFP3Q9NSD7 469 aa31.32■■■□□ 2.6
SSSCA1-207ENST00000533115 CHRNB2P17787 502 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 FMO1Q01740 532 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 LYSMD4Q5XG99 296 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 NT5C3BQ969T7 300 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 SIPA1Q96FS4 1042 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 ADAM33Q9BZ11 813 aa31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 INTS6Q9UL03 887 aaKnown RBP31.31■■■□□ 2.6
SSSCA1-207ENST00000533115 SMTNL1A8MU46 457 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 CYP1A1P04798 512 aaPredicted RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 CSKP41240 450 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 SULT1E1P49888 294 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 LIMK1P53667 647 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 FOXK2Q01167 660 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 CAMK2GQ13555 558 aaPredicted RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 RABGAP1LQ5R372 815 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 TTC39BQ5VTQ0 682 aaPredicted RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 MMS22LQ6ZRQ5 1243 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 DHX40Q8IX18 779 aaKnown RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 ZNF366Q8N895 744 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 PRCCQ92733 491 aaPredicted RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 ITM2CQ9NQX7 267 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 PIGVQ9NUD9 493 aa31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 KIAA1522Q9P206 1035 aaPredicted RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 USP36Q9P275 1121 aaKnown RBP31.3■■■□□ 2.6
SSSCA1-207ENST00000533115 TNRC6BQ9UPQ9 1833 aaKnown RBP31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 GOLGA8SH3BPF8 625 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 ASLP04424 464 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 TFE3P19532 575 aaPredicted RBP31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 PITRM1Q5JRX3 1037 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 FBXL22Q6P050 247 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 SYT12Q8IV01 421 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 DEFB119Q8N690 84 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 OR2T3Q8NH03 318 aa31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 PGAP3Q96FM1 320 aaPredicted RBP31.29■■■□□ 2.6
SSSCA1-207ENST00000533115 KHNYNO15037 678 aaKnown RBP31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 MOCS3O95396 460 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 DPP6P42658 865 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 CXCR3P49682 368 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 AUHQ13825 339 aaKnown RBP31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 SLC25A52Q3SY17 297 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 TRIM72Q6ZMU5 477 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 SND1Q7KZF4 910 aaKnown RBP eCLIP31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 CCAR2Q8N163 923 aaKnown RBP31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 TBCBQ99426 244 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 WDCPQ9H6R7 721 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 TMEM51Q9NW97 253 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 SUN2Q9UH99 717 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 TMEM59LQ9UK28 342 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 HS3ST4Q9Y661 456 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 CEP192Q8TEP8 1941 aa31.28■■■□□ 2.6
SSSCA1-207ENST00000533115 PATE3B3GLJ2 98 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 NDUFS2O75306 463 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 PAGE1O75459 146 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 F9P00740 461 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 ACADMP11310 421 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 CD6P30203 668 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 FLT3P36888 993 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 ST8SIA6P61647 398 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 DEUP1Q05D60 604 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 ZNF33AQ06730 810 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 BRMS1LQ5PSV4 323 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 CIR1Q86X95 450 aaPredicted RBP31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 RPRD1AQ96P16 312 aaPredicted RBP31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 TMEM74BQ9NUR3 256 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 ARHGEF38Q9NXL2 777 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 LAMA1P25391 3075 aa31.27■■■□□ 2.6
SSSCA1-207ENST00000533115 A0A1B0GVM2 712 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 DCDC2BA2VCK2 349 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 TCAF2A6NFQ2 919 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 ADCY5O95622 1261 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 MMP8P22894 467 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 ITPKAP23677 461 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 ZNF165P49910 485 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 TPMTP51580 245 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 PLEKHG6Q3KR16 790 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 ARCQ7LC44 396 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 IGSF8Q969P0 613 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 MYO19Q96H55 970 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 MRGPRX3Q96LB0 322 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 FUCA2Q9BTY2 467 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms