RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SLC46A2Q9BY10 475 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TPSD1Q9BZJ3 242 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GPR88Q9GZN0 384 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SNX25Q9H3E2 840 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 LRRC4CQ9HCJ2 640 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SSU72Q9NP77 194 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM9BQ9NQ34 198 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 FSCN3Q9NQT6 498 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CDH9Q9ULB4 789 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TICRRQ7Z2Z1 1910 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 APC2O95996 2303 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM8BA6NDV4 472 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 A8MXQ7 604 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 GOLGA6L22H0YM25 854 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TRDMT1O14717 391 aaKnown RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 PSMA7O14818 248 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 RHOBTB1O94844 696 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 FAM163BP0C2L3 166 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 KRT13P13646 458 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 CEACAM1P13688 526 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 PCSK1P29120 753 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 NDST1P52848 882 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TNNC1P63316 161 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 FAM193AP78312 1265 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 SMARCB1Q12824 385 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 MDH1BQ5I0G3 518 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TCERG1LQ5VWI1 586 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 KRT39Q6A163 491 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 ACOT1Q86TX2 421 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 SCN4BQ8IWT1 228 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 C12orf29Q8N999 325 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 C2orf15Q8WU43 125 aaKnown RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 SLC35C1Q96A29 364 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TWNKQ96RR1 684 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TSG101Q99816 390 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 SRRTQ9BXP5 876 aaKnown RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 B3GNT5Q9BYG0 378 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 CLSTN2Q9H4D0 955 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TASP1Q9H6P5 420 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 HSFX1Q9UBD0 423 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 HMGXB4Q9UGU5 601 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAGED2Q9UNF1 606 aaPredicted RBP7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 CTNND2Q9UQB3 1225 aa7.4□□□□□ -1.22
TRIM53CP-201ENST00000531490 KIF26AQ9ULI4 1882 aaPredicted RBP7.4□□□□□ -1.23
TRIM53CP-201ENST00000531490 GON4LQ3T8J9 2241 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ATG13O75143 517 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 BEST1O76090 585 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CLSTN1O94985 981 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 APBB3O95704 486 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 WNT11O96014 354 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 EPB41P11171 864 aaKnown RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CSRP1P21291 193 aaKnown RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 PIK3CAP42336 1068 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 DGKEP52429 567 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 GP2P55259 537 aaKnown RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 SIM1P81133 766 aaPredicted RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 LRRC63Q05C16 580 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 PLD1Q13393 1074 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 STIM1Q13586 685 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 RUNX3Q13761 415 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 DMC1Q14565 340 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 INPP5AQ14642 412 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CFAP221Q4G0U5 840 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 DCAF17Q5H9S7 520 aaPredicted RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 PMS2CLQ68D20 193 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ANO7Q6IWH7 933 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 TTC30AQ86WT1 665 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 IRF2BP1Q8IU81 584 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CAMKK1Q8N5S9 505 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 FRMD1Q8N878 549 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 B3GALNT2Q8NCR0 500 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 PIGKQ92643 395 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 USP13Q92995 863 aaPredicted RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 MYLPFQ96A32 169 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 BBC3Q96PG8 261 aaPredicted RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 CYP2S1Q96SQ9 504 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ZNF518BQ9C0D4 1074 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 RAB20Q9NX57 234 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 ASB3Q9Y575 518 aa7.39□□□□□ -1.23
TRIM53CP-201ENST00000531490 F8VP50 259 aa7.38□□□□□ -1.23
TRIM53CP-201ENST00000531490 SLC16A3O15427 465 aaKnown RBP7.38□□□□□ -1.23
TRIM53CP-201ENST00000531490 LEFTY1O75610 366 aa7.38□□□□□ -1.23
TRIM53CP-201ENST00000531490 CAPNS1P04632 268 aa7.38□□□□□ -1.23
TRIM53CP-201ENST00000531490 HNRNPLP14866 589 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRIM53CP-201ENST00000531490 CD58P19256 250 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms