RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FIBINQ8TAL6 211 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 IGSF8Q969P0 613 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 PEBP4Q96S96 227 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 MFSD1Q9H3U5 465 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 LUC7LQ9NQ29 371 aaKnown RBP14.94□□□□□ -0.02
CPSF1-206ENST00000531480 DNAJC17Q9NVM6 304 aaKnown RBP14.94□□□□□ -0.02
CPSF1-206ENST00000531480 CTTNBP2NLQ9P2B4 639 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 OR12D3Q9UGF7 316 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 STARD13Q9Y3M8 1113 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 MYO18AQ92614 2054 aaKnown RBP14.94□□□□□ -0.02
CPSF1-206ENST00000531480 A0A1B0GVM2 712 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 RCCD1A6NED2 376 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 E9PAM4 449 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TRIM24O15164 1050 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TBL1XO60907 577 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 PROSCO94903 275 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 LUC7L3O95232 432 aaKnown RBP14.93□□□□□ -0.02
CPSF1-206ENST00000531480 EGFP01133 1207 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 HLA-FP30511 346 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 L1CAMP32004 1257 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TNFRSF4P43489 277 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 DGKGP49619 791 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 SLC25A11Q02978 314 aaKnown RBP14.93□□□□□ -0.02
CPSF1-206ENST00000531480 LRRC32Q14392 662 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 UBXN2BQ14CS0 331 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 RABGAP1LQ5R372 815 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 GRAMD4Q6IC98 578 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TMEM105Q8N8V8 129 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 FLCNQ8NFG4 579 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 WFDC5Q8TCV5 224 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 KCNV2Q8TDN2 545 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 BTBD6Q96KE9 485 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 SIK2Q9H0K1 926 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 CHRDQ9H2X0 955 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 ARHGEF4Q9NR80 690 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 HCN2Q9UL51 889 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 VANGL2Q9ULK5 521 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 USP18Q9UMW8 372 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 NDRG2Q9UN36 371 aaKnown RBP14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TBC1D30Q9Y2I9 924 aa14.93□□□□□ -0.02
CPSF1-206ENST00000531480 TYW5A2RUC4 315 aaKnown RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CHURC1-FNTBB4DL54 471 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 FAM72CH0Y354 149 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 ARHGAP6O43182 974 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CLDN11O75508 207 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 APODP05090 189 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 IL1R2P27930 398 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 HTR7P34969 479 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 GGCXP38435 758 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 KIR2DL1P43626 348 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 IRAK1P51617 712 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 VAV2P52735 878 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 NUBP1P53384 320 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CDH4P55283 916 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 KRT83P78385 493 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CCZ1BP86790 482 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 EFHC2Q5JST6 749 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 ERMARDQ5T6L9 678 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 FAM72AQ5TYM5 149 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 FAM72DQ6L9T8 149 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 FAM72BQ86X60 149 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 SFTPA1Q8IWL2 248 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CCAR2Q8N163 923 aaKnown RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CCDC26Q8TAB7 109 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 FAM71BQ8TC56 605 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 TEKT4Q8WW24 435 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 BHMTQ93088 406 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 CALR3Q96L12 384 aaKnown RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 RPRD1AQ96P16 312 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-206ENST00000531480 MAGEB5Q9BZ81 275 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 LMAN1LQ9HAT1 526 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 SNX10Q9Y5X0 201 aa14.92□□□□□ -0.02
CPSF1-206ENST00000531480 ATG2BQ96BY7 2078 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 PRRT4C9JH25 899 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 PRPSAP2O60256 369 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 LRIG2O94898 1065 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 IPO7O95373 1038 aaKnown RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 TCF4P15884 667 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 AVPR2P30518 371 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 ZNF135P52742 658 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 PLK1P53350 603 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 KDSRQ06136 332 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 SLC12A1Q13621 1099 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 GAS6Q14393 721 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 EIF4HQ15056 248 aaKnown RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 DPYSL2Q16555 572 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 ALFQ53S48 1182 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 FSCBQ5H9T9 825 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 DAB2IPQ5VWQ8 1189 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 TMEM215Q68D42 235 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 CXorf57Q6NSI4 855 aaKnown RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 LRRC31Q6UY01 552 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 ANKS1BQ7Z6G8 1248 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms