RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ELOVL2Q9NXB9 296 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 AIPL1Q9NZN9 384 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 SUSD2Q9UGT4 822 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 SRRM3A6NNA2 597 aaPredicted RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 SH3BP5O60239 455 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 PRKCHP24723 683 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 CASP14P31944 242 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 CDH5P33151 784 aaPredicted RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 TPMTP51580 245 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 TKTL1P51854 596 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 COPAP53621 1224 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 ZBED6P86452 979 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 FMO1Q01740 532 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 CDR2Q01850 454 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 GRIK2Q13002 908 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 TRIM14Q14142 442 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 ASIC2Q16515 512 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 WDR45BQ5MNZ6 344 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 SFMBT2Q5VUG0 894 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 PM20D1Q6GTS8 502 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 RSRC2Q7L4I2 434 aaKnown RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 TMPRSS6Q8IU80 811 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 ARHGAP18Q8N392 663 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 CHCHD4Q8N4Q1 142 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 STK32AQ8WU08 396 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 ZCCHC14Q8WYQ9 949 aaKnown RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 HSFY1Q96LI6 401 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 SYT11Q9BT88 431 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 GPR174Q9BXC1 333 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 SLC4A5Q9BY07 1137 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 ULBP1Q9BZM6 244 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 STRIP2Q9ULQ0 834 aa18.58■□□□□ 0.56
PTPN11-204ENST00000531326 LUC7L2Q9Y383 392 aaKnown RBP18.58■□□□□ 0.56
PTPN11-204ENST00000531326 FAM221BA6H8Z2 402 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 ZBED1O96006 694 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 CYBBP04839 570 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 NCAM1P13591 858 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 GNSP15586 552 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 PRKCIP41743 596 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 ADIGQ0VDE8 80 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-204ENST00000531326 SLC14A1Q13336 389 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 PDCLQ13371 301 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 TRIP4Q15650 581 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-204ENST00000531326 TMC6Q7Z403 805 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 RAB44Q7Z6P3 723 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-204ENST00000531326 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 DDI1Q8WTU0 396 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 UCMAQ8WVF2 138 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 SYN2Q92777 582 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-204ENST00000531326 PLD4Q96BZ4 506 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 SIPA1Q96FS4 1042 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 LRRC4Q9HBW1 653 aa18.57■□□□□ 0.56
PTPN11-204ENST00000531326 MUC22E2RYF6 1773 aaPredicted RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 PKD1L2Q7Z442 2459 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 MEI4A8MW99 385 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 H0Y626 953 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 PIK3R2O00459 728 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 SYNCRIPO60506 623 aaKnown RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 TRIM16O95361 564 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 IGLV3-19P01714 112 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 CCDC172P0C7W6 258 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 HOXD9P28356 352 aaPredicted RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 EIF4HQ15056 248 aaKnown RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 DCAF12L1Q5VU92 463 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 CACUL1Q86Y37 369 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 SCML4Q8N228 414 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 ZCCHC9Q8N567 271 aaKnown RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 ZNF397Q8NF99 534 aaPredicted RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 CADM4Q8NFZ8 388 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 PCDHB18PQ96TA0 734 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 AGPAT1Q99943 283 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 SLC2A11Q9BYW1 496 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 CIPCQ9C0C6 399 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 NUCKS1Q9H1E3 243 aaKnown RBP18.56■□□□□ 0.56
PTPN11-204ENST00000531326 PDCL3Q9H2J4 239 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 TJP2Q9UDY2 1190 aa18.56■□□□□ 0.56
PTPN11-204ENST00000531326 NUMA1Q14980 2115 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 A0A1B0GTW7 788 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 LSM8O95777 96 aaKnown RBP18.55■□□□□ 0.56
PTPN11-204ENST00000531326 CYP1A1P04798 512 aaPredicted RBP18.55■□□□□ 0.56
PTPN11-204ENST00000531326 EPHX1P07099 455 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 LCP1P13796 627 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 NOMO3P69849 1222 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 BNC1Q01954 994 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 HNRNPDQ14103 355 aaKnown RBP18.55■□□□□ 0.56
PTPN11-204ENST00000531326 ARID5BQ14865 1188 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 TRIP6Q15654 476 aaKnown RBP18.55■□□□□ 0.56
PTPN11-204ENST00000531326 ZNF423Q2M1K9 1284 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 HGSNATQ68CP4 663 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 TMEM110Q86TL2 294 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 NAXDQ8IW45 347 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 TMEM35BQ8NCS4 154 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 PRCCQ92733 491 aaPredicted RBP18.55■□□□□ 0.56
PTPN11-204ENST00000531326 CPXM1Q96SM3 734 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 HAUS4Q9H6D7 363 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 IL21RQ9HBE5 538 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 CNGB3Q9NQW8 809 aa18.55■□□□□ 0.56
PTPN11-204ENST00000531326 ST7Q9NRC1 585 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms