RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 RASA2Q15283 850 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 KCTD16Q68DU8 428 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 KIAA1841Q6NSI8 718 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 KLHDC10Q6PID8 442 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 ZNF534Q76KX8 674 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 C14orf80Q86SX3 495 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CAND1Q86VP6 1230 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 KLHDC8BQ8IXV7 354 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CCDC13Q8IYE1 715 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 TCEAL8Q8IYN2 117 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 VPS52Q8N1B4 723 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 AGGF1Q8N302 714 aaeCLIP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CCDC33Q8N5R6 958 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 LZTR1Q8N653 840 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 NETO2Q8NC67 525 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 PDZD8Q8NEN9 1154 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 UHMK1Q8TAS1 419 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 EPS8L3Q8TE67 593 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 PRMT1Q99873 361 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 ZBP1Q9H171 429 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 CATSPERBQ9H7T0 1116 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 MARCH2Q9P0N8 246 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 FETUBQ9UGM5 382 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 HBS1LQ9Y450 684 aaKnown RBP11.23□□□□□ -0.61
SRPRA-205ENST00000531104 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 TEX264Q9Y6I9 313 aa11.23□□□□□ -0.61
SRPRA-205ENST00000531104 ZNF840PA6NDX5 716 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 DRGXA6NNA5 263 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 E7EVH7 732 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 GOLGA8MH3BSY2 632 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CACNG3O60359 315 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 TBX18O95935 607 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 URODP06132 367 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CSH1P0DML2 217 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CSH2P0DML3 217 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 MLNP12872 115 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 EN2P19622 333 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 NR1D1P20393 614 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 GCAP28676 217 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 KPNA1P52294 538 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 COG7P83436 770 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CREMQ03060 361 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 AP1B1Q10567 949 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 EFEMP1Q12805 493 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 PARP6Q2NL67 630 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CCDC38Q502W7 563 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 FAM182AQ5T1J6 154 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 ARHGEF18Q6ZSZ5 1173 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 ZBED8Q8IZ13 594 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 ZNF567Q8N184 647 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 RTL3Q8N8U3 475 aaKnown RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 FATE1Q969F0 183 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 BTN2A3PQ96KV6 586 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 YME1L1Q96TA2 773 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 VAT1Q99536 393 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 FERMT1Q9BQL6 677 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 GORASP1Q9BQQ3 440 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 SIK2Q9H0K1 926 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 CCSER2Q9H7U1 834 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 PPCSQ9HAB8 311 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 ZNF212Q9UDV6 495 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
SRPRA-205ENST00000531104 YIPF1Q9Y548 306 aa11.22□□□□□ -0.61
SRPRA-205ENST00000531104 SLC12A8A0AV02 714 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 C2CD2LO14523 706 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 TLR5O60602 858 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 BANF1O75531 89 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 APOEP02649 317 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 IVLP07476 585 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 SRGAP2BP0DMP2 458 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 CTSAP10619 480 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 RHOQP17081 205 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 CCNCP24863 283 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 MMP13P45452 471 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 PPP3CCP48454 512 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 TUBP50607 506 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 MAGOHP61326 146 aaKnown RBP11.21□□□□□ -0.61
SRPRA-205ENST00000531104 FPGSQ05932 587 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 BBS9Q3SYG4 887 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 FAXCQ5TGI0 409 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 TADA2BQ86TJ2 420 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 LRRC49Q8IUZ0 686 aa11.21□□□□□ -0.61
SRPRA-205ENST00000531104 IGDCC3Q8IVU1 814 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms