RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CETN2P41208 172 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 MLLT6P55198 1093 aaPredicted RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 MRPS25P82663 173 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 GBE1Q04446 702 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 SNX1Q13596 522 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 DPYSQ14117 519 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 PPP2R5EQ16537 467 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ARTNQ5T4W7 220 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 MANEALQ5VSG8 457 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 LRRC31Q6UY01 552 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 PSTKQ8IV42 348 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 RASGEF1CQ8N431 466 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 NPWQ8N729 165 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 FGF14Q92915 247 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ASIC4Q96FT7 647 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 CELF6Q96J87 481 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 RNF157Q96PX1 679 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 CARD6Q9BX69 1037 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 OSBPL2Q9H1P3 480 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 LINC00597Q9H2U6 94 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 C10orf88Q9H8K7 445 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 NDFIP2Q9NV92 336 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ZFP37Q9Y6Q3 630 aaPredicted RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 VCANP13611 3396 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 HEPACAM2A8MVW5 462 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 KRIT1O00522 736 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 APOL1O14791 398 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 PRLRP16471 622 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 TAZQ16635 292 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ADGRF1Q5T601 910 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 NCBP2-AS2Q69YL0 99 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 PARM1Q6UWI2 310 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ZNF683Q8IZ20 524 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 CELF5Q8N6W0 485 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 PLD5Q8N7P1 536 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 TDRD5Q8NAT2 981 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 TTC8Q8TAM2 541 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 FAM71BQ8TC56 605 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 SUSD6Q92537 303 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 HLA-CQ95604 372 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 FAF2Q96CS3 445 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 PLA2G2FQ9BZM2 168 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
SOX6-213ENST00000530378 GDE1Q9NZC3 331 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 MYO10Q9HD67 2058 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 TICRRQ7Z2Z1 1910 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 COL4A3Q01955 1670 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 MBTPS2O43462 519 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 TBL1XO60907 577 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 LAMP2P13473 410 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 PFKLP17858 780 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 COPS2P61201 443 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 OTUD4Q01804 1114 aaKnown RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 SMAD4Q13485 552 aaKnown RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 SIX1Q15475 284 aaPredicted RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 WHAMMP3Q1A5X7 153 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 HTR3DQ70Z44 454 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 DDX42Q86XP3 938 aaKnown RBP eCLIP10.97□□□□□ -0.65
SOX6-213ENST00000530378 KLHL7Q8IXQ5 586 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 MAFAQ8NHW3 353 aaPredicted RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 ACTRT1Q8TDG2 376 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 RSAD2Q8WXG1 361 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 RPGRIP1Q96KN7 1286 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 C1orf74Q96LT6 269 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 RPP25Q9BUL9 199 aaKnown RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 ZYG11BQ9C0D3 744 aa10.97□□□□□ -0.65
SOX6-213ENST00000530378 DDX47Q9H0S4 455 aaKnown RBP10.97□□□□□ -0.65
SOX6-213ENST00000530378 E2F8A0AVK6 867 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 C2CD4DB7Z1M9 353 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 DFFAO00273 331 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 CES2O00748 559 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 DCLK1O15075 740 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 TJP3O95049 919 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 ARSAP15289 507 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 PTPN7P35236 360 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 TNK2Q07912 1038 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 ANO4Q32M45 955 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 RABGAP1LQ5R372 815 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 SLC9A4Q6AI14 798 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 TMCO3Q6UWJ1 677 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 VITQ6UXI7 678 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 BBS12Q6ZW61 710 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 ZC3H18Q86VM9 953 aaKnown RBP10.96□□□□□ -0.65
SOX6-213ENST00000530378 CARNMT1Q8N4J0 409 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 ACTL9Q8TC94 416 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 WFDC5Q8TCV5 224 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 DDI1Q8WTU0 396 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 DEPDC1BQ8WUY9 529 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 NECTIN4Q96NY8 510 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 EBF3Q9H4W6 596 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 ZFP14Q9HCL3 533 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.65
SOX6-213ENST00000530378 TRIOO75962 3097 aa10.96□□□□□ -0.65
SOX6-213ENST00000530378 NEDD8-MDP1E9PL57 170 aa10.95□□□□□ -0.66
SOX6-213ENST00000530378 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
SOX6-213ENST00000530378 KCNJ1P48048 391 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms