RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MIS12Q9H081 205 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BRD9Q9H8M2 597 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GKN1Q9NS71 199 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ABCC13Q9NSE7 274 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 THG1LQ9NWX6 298 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 AIPL1Q9NZN9 384 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 NAGPAQ9UK23 515 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 NOCTQ9UK39 431 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CDV3Q9UKY7 258 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TMEM98Q9Y2Y6 226 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TRIOO75962 3097 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 A0A1W2PQJ5 194 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 E5RJQ4 531 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 LEFTY2O00292 366 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PIK3R2O00459 728 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PAPSS1O43252 624 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 MBL2P11226 248 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FERP16591 822 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TSPAN7P41732 249 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GABRB2P47870 512 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 MMP16P51512 607 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SNX16P57768 344 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FMO1Q01740 532 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PFKPQ01813 784 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CDR2Q01850 454 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PDCLQ13371 301 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TOMM20Q15388 145 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ZNF77Q15935 545 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 C21orf62-AS1Q17RA5 79 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SLC44A4Q53GD3 710 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BTBD8Q5XKL5 378 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TTC19Q6DKK2 380 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 HFE2Q6ZVN8 426 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BMP8AQ7Z5Y6 402 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 DAAM2Q86T65 1068 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TADA2BQ86TJ2 420 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PASD1Q8IV76 773 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 YAF2Q8IY57 180 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ADGRG2Q8IZP9 1017 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 DRAXINQ8NBI3 349 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TMEM35BQ8NCS4 154 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CCDC26Q8TAB7 109 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CLEC4CQ8WTT0 213 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SLC20A1Q8WUM9 679 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 IQCDQ96DY2 449 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 IFT43Q96FT9 208 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RSRC1Q96IZ7 334 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 NOX5Q96PH1 765 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PLEKHG4BQ96PX9 1271 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CPXM1Q96SM3 734 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CDK5RAP1Q96SZ6 601 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 KLF16Q9BXK1 252 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 LINC00597Q9H2U6 94 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ETNK1Q9HBU6 452 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TBK1Q9UHD2 729 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 XPO7Q9UIA9 1087 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TSR3Q9UJK0 312 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 DNMT3LQ9UJW3 386 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 NUDT5Q9UKK9 219 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CAPN11Q9UMQ6 739 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 JRKLQ9Y4A0 524 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CPQQ9Y646 472 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ITIH6Q6UXX5 1313 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF638Q14966 1978 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 E2F8A0AVK6 867 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 KRBA1A5PL33 1030 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 TMEM221A6NGB7 291 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 LRRC53A6NM62 1247 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 H0Y3Z8 333 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 M0R296 226 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 AP5Z1O43299 807 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 GREM1O60565 184 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 LSM8O95777 96 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 LTFP02788 710 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 FYNP06241 537 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 GLI1P08151 1106 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 UNGP13051 313 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 GLULP15104 373 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 GSTT1P30711 240 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 HOXC13P31276 330 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 PRKCIP41743 596 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 NEK2P51955 445 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 STARD6P59095 220 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 YWHAZP63104 245 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 NOMO3P69849 1222 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 COG7P83436 770 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 PRKCQQ04759 706 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 RUNX3Q13761 415 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 MTF1Q14872 753 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 TBC1D25Q3MII6 688 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms