RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 PPP1R2P41236 205 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 MATKP42679 507 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 PAK1Q13153 545 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 TAF5Q15542 800 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 ZNF423Q2M1K9 1284 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 LGI2Q8N0V4 545 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 ZNF606Q8WXB4 792 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 BTBD1Q9H0C5 482 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 TM9SF3Q9HD45 589 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 TM7SF3Q9NS93 570 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 SLCO3A1Q9UIG8 710 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 PCOLCE2Q9UKZ9 415 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 TLR6Q9Y2C9 796 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 SNX11Q9Y5W9 270 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 FAM208BQ5VWN6 2430 aa16.1■□□□□ 0.17
CLNS1A-210ENST00000528364 FAM221BA6H8Z2 402 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 TTC34A8MYJ7 566 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 E5RJQ4 531 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 H0Y626 953 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 TRIM16O95361 564 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 MARSP56192 900 aaKnown RBP16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 RAP1GAP2Q684P5 730 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 ZNF776Q68DI1 518 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 APCDD1Q8J025 514 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 GANCQ8TET4 914 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 SERPINB11Q96P15 392 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 MED15Q96RN5 788 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 DDX50Q9BQ39 737 aaKnown RBP16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 ORAI3Q9BRQ5 295 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 PCED1AQ9H1Q7 454 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 SERGEFQ9UGK8 458 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 ERVW-1Q9UQF0 538 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 BTBD3Q9Y2F9 522 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 PLXNB3Q9ULL4 1909 aa16.09■□□□□ 0.17
CLNS1A-210ENST00000528364 PKD1L2Q7Z442 2459 aa16.08■□□□□ 0.17
CLNS1A-210ENST00000528364 TMEM8BA6NDV4 472 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 BECN2A8MW95 431 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 CAPN9O14815 690 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 THAP12O43422 761 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 CER1O95813 267 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 GNA14O95837 355 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 SLC9A1P19634 815 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 TACR2P21452 398 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 ACADSBP45954 432 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 ZBTB16Q05516 673 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 HNRNPA1L2Q32P51 320 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 PRAMEF14Q5SWL7 426 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 DBX2Q6ZNG2 339 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 TMEM110Q86TL2 294 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 WDTC1Q8N5D0 677 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 RHBDD1Q8TEB9 315 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 ADAMTS14Q8WXS8 1223 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 NEUROG2Q9H2A3 272 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 PABPC3Q9H361 631 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 FBXL12Q9NXK8 326 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 ANKRD6Q9Y2G4 727 aa16.08■□□□□ 0.16
CLNS1A-210ENST00000528364 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 MID1O15344 667 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 LUC7L3O95232 432 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 CAPNS1P04632 268 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 IGHV4-34P06331 123 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 ZNF883P0CG24 379 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 CD27P26842 260 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 USP8P40818 1118 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 AFF3P51826 1226 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 CDH18Q13634 790 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 CAMK4Q16566 473 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 IL27RAQ6UWB1 636 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 CIR1Q86X95 450 aaPredicted RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 MARCH9Q86YJ5 346 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 MMAAQ8IVH4 418 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 FAM129BQ96TA1 746 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 FBRSQ9HAH7 460 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 SGK2Q9HBY8 427 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 TMEM131Q92545 1883 aa16.07■□□□□ 0.16
CLNS1A-210ENST00000528364 ZZEF1O43149 2961 aa16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 SYNJ2BP-COX16A0A087WUM0 186 aa16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 A0A1W2PP55 124 aa16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 H0Y8X5 98 aa16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 SART1O43290 800 aaKnown RBP16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 ASLP04424 464 aa16.06■□□□□ 0.16
CLNS1A-210ENST00000528364 GNA15P30679 374 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms