RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RFWD3Q6PCD5 774 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SLC23A3Q6PIS1 610 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 KIAA1324Q6UXG2 1013 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 ARCQ7LC44 396 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 TAC4Q86UU9 113 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ADIPOR2Q86V24 386 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 PASD1Q8IV76 773 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 OR2T3Q8NH03 318 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ZNF419Q96HQ0 510 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 SPAG5Q96R06 1193 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 LSM14BQ9BX40 385 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 TMEM245Q9H330 911 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 DDIT4Q9NX09 232 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 TAB2Q9NYJ8 693 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHD7-208ENST00000528280 STIM2Q9P246 746 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 LIMA1Q9UHB6 759 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 PILRBQ9UKJ0 227 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 CLEC4EQ9ULY5 219 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 SLC6A14Q9UN76 642 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 RAD54BQ9Y620 910 aa9.94□□□□□ -0.82
CHD7-208ENST00000528280 ASH1LQ9NR48 2969 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
CHD7-208ENST00000528280 TARSL2A2RTX5 802 aaKnown RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 F8VZ95 297 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 LUC7L3O95232 432 aaKnown RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 MOCS2O96007 188 aaPredicted RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 IGLV3-19P01714 112 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 SYPP08247 313 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 TACR2P21452 398 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 STAT1P42224 750 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 ARID5BQ14865 1188 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 CCDC6Q16204 474 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 BRMS1LQ5PSV4 323 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 RNF219Q5W0B1 726 aaPredicted RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 TMEM215Q68D42 235 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 NADSYN1Q6IA69 706 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 OLFML1Q6UWY5 402 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 TRIM72Q6ZMU5 477 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 FAM183BPQ6ZVS7 135 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 LGI2Q8N0V4 545 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 CARNMT1Q8N4J0 409 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 KDF1Q8NAX2 398 aaPredicted RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 NEK11Q8NG66 645 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 PGAP3Q96FM1 320 aaPredicted RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 P2RY11Q96G91 374 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 C1orf74Q96LT6 269 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 WDCPQ9H6R7 721 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 TMEM9BQ9NQ34 198 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 USP36Q9P275 1121 aaKnown RBP9.93□□□□□ -0.82
CHD7-208ENST00000528280 CYP8B1Q9UNU6 501 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 NCKAP1Q9Y2A7 1128 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 FHOD1Q9Y613 1164 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 THADAQ6YHU6 1953 aa9.93□□□□□ -0.82
CHD7-208ENST00000528280 EML5Q05BV3 1969 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 IGF2RP11717 2491 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 M0QYT0 321 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 TM4SF5O14894 197 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 GDF9O60383 454 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 DAB1O75553 588 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 DNTTP04053 509 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 ERBB2P04626 1255 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 SERPINF2P08697 491 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 CD70P32970 193 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 SOX5P35711 763 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 PTGER3P43115 390 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 TPMTP51580 245 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 PLK1P53350 603 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 ATXN3P54252 364 aaPredicted RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 RNASE9P60153 205 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 POLR2FP61218 127 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 RPS24P62847 133 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 IRX4P78413 519 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 ECT2LQ008S8 904 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 CDR2Q01850 454 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 UBXN1Q04323 297 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 GFPT1Q06210 699 aaPredicted RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 NME3Q13232 169 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 SYCP1Q15431 976 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 TAF5Q15542 800 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 SLC25A52Q3SY17 297 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 FILIP1LQ4L180 1135 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 TRIM61Q5EBN2 209 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 RAP1GAP2Q684P5 730 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 LRRC31Q6UY01 552 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 CHSY1Q86X52 802 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 RGL4Q8IZJ4 473 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 CFAP52Q8N1V2 620 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 FRMD1Q8N878 549 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 SORCS1Q8WY21 1168 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms