RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 FUT11Q495W5 492 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 SERPINA13PQ6UXR4 307 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 KDM1BQ8NB78 822 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 SORCS1Q8WY21 1168 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 FBRSQ9HAH7 460 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 PRDM16Q9HAZ2 1276 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 PIGVQ9NUD9 493 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 ARHGEF38Q9NXL2 777 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 DLL3Q9NYJ7 618 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 MBD1Q9UIS9 605 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 DMDP11532 3685 aa12.52□□□□□ -0.41
TRAPPC4-209ENST00000528230 DOCK4Q8N1I0 1966 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 A0A1B0GVM2 712 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 TCAF2A6NFQ2 919 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 H0Y626 953 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 AP5Z1O43299 807 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PAGE1O75459 146 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 ENDOD1O94919 500 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 EPHX1P07099 455 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PRKCHP24723 683 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 FLT3P36888 993 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 SULT1E1P49888 294 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PLK1P53350 603 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 TPM4P67936 248 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 CREB5Q02930 508 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 CENPCQ03188 943 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 AUHQ13825 339 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PUM1Q14671 1186 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 NR1I3Q14994 352 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 FNDC3BQ53EP0 1204 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 FBXL22Q6P050 247 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 MMS22LQ6ZRQ5 1243 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 BNIPLQ7Z465 357 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 TMPRSS6Q8IU80 811 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 CYB5D2Q8WUJ1 264 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PCDHB18PQ96TA0 734 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 TBCBQ99426 244 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 AGPAT1Q99943 283 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 EDEM3Q9BZQ6 932 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 INTS6Q9UL03 887 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 HS3ST4Q9Y661 456 aa12.51□□□□□ -0.41
TRAPPC4-209ENST00000528230 PI4KAP42356 2102 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 IGLV3-19P01714 112 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 CALB1P05937 261 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 SRPRAP08240 638 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 TFE3P19532 575 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 OXTRP30559 389 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 CSKP41240 450 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 NSFP46459 744 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 COPAP53621 1224 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 ST8SIA6P61647 398 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 RSPO4Q2I0M5 234 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 CLEC16AQ2KHT3 1053 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 PLEKHG6Q3KR16 790 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 FSCBQ5H9T9 825 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 PITRM1Q5JRX3 1037 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 PPP1R2P3Q6NXS1 205 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLC30A5Q8TAD4 765 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 BAP1Q92560 729 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 SIPA1Q96FS4 1042 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 NAP1L5Q96NT1 182 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 RPRD1AQ96P16 312 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 HAPLN3Q96S86 360 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 ADAM22Q9P0K1 906 aa12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-209ENST00000528230 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms