RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 GOT1P17174 413 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 SLC8A1P32418 973 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 CD70P32970 193 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 VAMP7P51809 220 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 UCNP55089 124 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 INSM1Q01101 510 aaPredicted RBP12.79□□□□□ -0.36
SRPRA-202ENST00000527817 CST6Q15828 149 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 ZNF394Q53GI3 561 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 PIK3R6Q5UE93 754 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 BSPRYQ5W0U4 402 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 SND1Q7KZF4 910 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■□□□□ 8.7
SRPRA-202ENST00000527817 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 ZNF248Q8NDW4 579 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 FIBINQ8TAL6 211 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 RNF139Q8WU17 664 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 NDRG1Q92597 394 aaKnown RBP12.79□□□□□ -0.36
SRPRA-202ENST00000527817 AZIN2Q96A70 460 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 ZNF578Q96N58 590 aaPredicted RBP12.79□□□□□ -0.36
SRPRA-202ENST00000527817 FAM129BQ96TA1 746 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 SFMBT1Q9UHJ3 866 aa12.79□□□□□ -0.36
SRPRA-202ENST00000527817 IRAK2O43187 625 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 LATO43561 262 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 KLRC4O43908 158 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 MAGEC1O60732 1142 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 TBL1XO60907 577 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 RNASEH2AO75792 299 aaKnown RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 MT-CO3P00414 261 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 AFMP43652 599 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 GCLMP48507 274 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 SGSHP51688 502 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 RAD23BP54727 409 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 MCCD1P59942 119 aaPredicted RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 ENPEPQ07075 957 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 PPP3CAQ08209 521 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 IQCHQ86VS3 1027 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 SPATS2Q86XZ4 545 aaKnown RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 UNC45BQ8IWX7 931 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 LSMEM2Q8N112 164 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 KIAA0895Q8NCT3 520 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 HIC2Q96JB3 615 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 MRGPRX3Q96LB0 322 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 LGMNQ99538 433 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 ABCC13Q9NSE7 274 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 INTS6Q9UL03 887 aaKnown RBP12.78□□□□□ -0.36
SRPRA-202ENST00000527817 PIEZO2Q9H5I5 2752 aa12.78□□□□□ -0.36
SRPRA-202ENST00000527817 B8ZZF3 427 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 XPO1O14980 1071 aaKnown RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 YEATS4O95619 227 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 NUDT1P36639 197 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 CSKP41240 450 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 OVGP1Q12889 678 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 BROXQ5VW32 411 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 RFWD3Q6PCD5 774 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 MFN1Q8IWA4 741 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 SCML4Q8N228 414 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 OR14C36Q8NHC7 312 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 SNRNP27Q8WVK2 155 aaKnown RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 EDEM1Q92611 657 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-202ENST00000527817 CLMPQ9H6B4 373 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 CISHQ9NSE2 258 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3DA0A087WVF3 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3IA0A087WXS9 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 EDDM13A0A1B0GTR0 161 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 YJEFN3A6XGL0 299 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 E7ENQ6 273 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TULP2O00295 520 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 ACSL4O60488 711 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 IGLV3-27P01718 113 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 C5AR1P21730 350 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 SLC11A2P49281 568 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 KCNC4Q03721 635 aa12.76□□□□□ -0.37
SRPRA-202ENST00000527817 ZNF211Q13398 564 aaPredicted RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 FAM133BQ5BKY9 247 aaKnown RBP12.76□□□□□ -0.37
SRPRA-202ENST00000527817 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms