RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SFSWAPQ12872 951 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 SUZ12Q15022 739 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 MS4A13Q5J8X5 152 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 ADAT2Q7Z6V5 191 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 DHX40Q8IX18 779 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 LGI2Q8N0V4 545 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 RHBDD1Q8TEB9 315 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 ZNF606Q8WXB4 792 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 BIRC7Q96CA5 298 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 PRICKLE1Q96MT3 831 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 MED15Q96RN5 788 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 TJP2Q9UDY2 1190 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 PCOLCE2Q9UKZ9 415 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 CNTN6Q9UQ52 1028 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 FNDC3AQ9Y2H6 1198 aaKnown RBP23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 GADD45BO75293 160 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 ZNF883P0CG24 379 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 NNTQ13423 1086 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 KIF19Q2TAC6 998 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 DCAF6Q58WW2 860 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 ZC3H12AQ5D1E8 599 aaKnown RBP23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 MMS22LQ6ZRQ5 1243 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 TAC4Q86UU9 113 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 STK32AQ8WU08 396 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 MYEOVQ96EZ4 313 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLC39A13Q96H72 371 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 CRACR2AQ9BSW2 395 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 RSPH9Q9H1X1 276 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 FBXL12Q9NXK8 326 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 KIAA1522Q9P206 1035 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLC12A6Q9UHW9 1150 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 INTS6Q9UL03 887 aaKnown RBP23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 SCML1Q9UN30 329 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 CFAP47Q6ZTR5 3102 aa23.18■■□□□ 1.3
TRAPPC4-208ENST00000527680 SRRM3A6NNA2 597 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 SIN3BO75182 1162 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 LUC7L3O95232 432 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 CD27P26842 260 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 GNA15P30679 374 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 RPL34P49207 117 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 MARSP56192 900 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 YWHAZP63104 245 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 FSCBQ5H9T9 825 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 PITRM1Q5JRX3 1037 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 RNF219Q5W0B1 726 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 ENOSF1Q7L5Y1 443 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 CHSY1Q86X52 802 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 ADAMTS14Q8WXS8 1223 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 LMLNQ96KR4 655 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 OMDQ99983 421 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLC4A5Q9BY07 1137 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 POPDC2Q9HBU9 364 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 TM9SF3Q9HD45 589 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 ERVW-1Q9UQF0 538 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 ANKRD6Q9Y2G4 727 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 SNX11Q9Y5W9 270 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLCO1B1Q9Y6L6 691 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 IGF2RP11717 2491 aa23.17■■□□□ 1.3
TRAPPC4-208ENST00000527680 FAM221BA6H8Z2 402 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 E5RJQ4 531 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 KCNK3O14649 394 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 PAPSS1O43252 624 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 TRUB2O95900 331 aaKnown RBP23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 ARHGAP44Q17R89 818 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 HNRNPA1L2Q32P51 320 aaKnown RBP23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 BEND5Q7L4P6 421 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 TMEM110Q86TL2 294 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 ATP6V0D2Q8N8Y2 350 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 RNF34Q969K3 372 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 PABPC3Q9H361 631 aaKnown RBP23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 THAP9Q9H5L6 903 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 ACP6Q9NPH0 428 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 XPO7Q9UIA9 1087 aaKnown RBP23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 CABIN1Q9Y6J0 2220 aa23.16■■□□□ 1.3
TRAPPC4-208ENST00000527680 GOLGA8CPA6NN73 597 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 CBFA2T3O75081 653 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 SRPRAP08240 638 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 TACR2P21452 398 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 NNMTP40261 264 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 CTSOP43234 321 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 ECT2LQ008S8 904 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 USP30Q70CQ3 517 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLCO6A1Q86UG4 719 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 MMAAQ8IVH4 418 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 MYO19Q96H55 970 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 BTN2A3PQ96KV6 586 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 FAM81BQ96LP2 452 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 CDC6Q99741 560 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 OSGEPQ9NPF4 335 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 CYTH4Q9UIA0 394 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 SLCO3A1Q9UIG8 710 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 PCDHGB2Q9Y5G2 931 aa23.15■■□□□ 1.3
TRAPPC4-208ENST00000527680 AKAP13Q12802 2813 aa23.14■■□□□ 1.3
TRAPPC4-208ENST00000527680 SYNJ2BP-COX16A0A087WUM0 186 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 TARSL2A2RTX5 802 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 TTC34A8MYJ7 566 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 F5H5T6 163 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 MID1O15344 667 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 FLRT2O43155 660 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms