RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RXFP3Q9NSD7 469 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 FZD10Q9ULW2 581 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 KCNQ3O43525 872 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 RFPL1O75677 317 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 ARP10275 920 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 FCGR1AP12314 374 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 PMS2P54278 862 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 DLX5P56178 289 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 POU3F1Q03052 451 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 POU5F1BQ06416 359 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 PMPCAQ10713 525 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 KIF5AQ12840 1032 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 ZNF672Q499Z4 452 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 ARHGAP29Q52LW3 1261 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 DCAF12L2Q5VW00 463 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 CCDC149Q6ZUS6 474 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 MUC20Q8N307 709 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 WBP2Q969T9 261 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 SPRY4Q9C004 299 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 FAM204AQ9H8W3 233 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 C1orf112Q9NSG2 853 aa3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 NOB1Q9ULX3 412 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-219ENST00000526299 A6NNZ2 444 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 F8W8V4 182 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 M0QZQ0 153 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 MGEA5O60502 916 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 PPP6R2O75170 966 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 KAT7O95251 611 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 ANXA2P07355 339 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 POLD3Q15054 466 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 KIAA0753Q2KHM9 967 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 ENTPD8Q5MY95 495 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 DNTTIP2Q5QJE6 756 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 FAXCQ5TGI0 409 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 TLDC1Q6P9B6 456 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 CRTC1Q6UUV9 634 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 CREB3L2Q70SY1 520 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 H1FNTQ75WM6 255 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 CLASRPQ8N2M8 674 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 SRFBP1Q8NEF9 429 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 OR52N4Q8NGI2 321 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 RTP4Q96DX8 246 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 ZNF419Q96HQ0 510 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 MSLNLQ96KJ4 702 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 POLDIP3Q9BY77 421 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 CDH19Q9H159 772 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 TCF7L2Q9NQB0 619 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 ZIM2Q9NZV7 527 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 DTX4Q9Y2E6 619 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 MMP24Q9Y5R2 645 aa3.09□□□□□ -1.91
ECHDC1-219ENST00000526299 LMTK3Q96Q04 1460 aa3.09□□□□□ -1.92
ECHDC1-219ENST00000526299 PLSCR5A0PG75 271 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 PRR23AA6NEV1 266 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 ERI2A8K979 691 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 I6L893 689 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 CNTN5O94779 1100 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 IGLV2-11P01706 119 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 IBSPP21815 317 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 TGM2P21980 687 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 TAF6P49848 677 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 POLE2P56282 527 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 SLC37A1P57057 533 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 SLC39A14Q15043 492 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 PTPROQ16827 1216 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 FSCBQ5H9T9 825 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 PPP4R4Q6NUP7 873 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 ZNF449Q6P9G9 518 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 DARS2Q6PI48 645 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 C16orf89Q6UX73 402 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 MEX3BQ6ZN04 569 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 PIK3AP1Q6ZUJ8 805 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 ZNF367Q7RTV3 350 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 CLIP4Q8N3C7 705 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 FAM156AQ8NDB6 213 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 ENGASEQ8NFI3 743 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 TAF15Q92804 592 aaKnown RBP eCLIP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 LRRC46Q96FV0 321 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 DUX5Q96PT3 197 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 NODALQ96S42 347 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 STRBPQ96SI9 672 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 IL21RQ9HBE5 538 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 TNFSF13BQ9Y275 285 aa3.08□□□□□ -1.92
ECHDC1-219ENST00000526299 A0A087WZ62 844 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 LOC102724159A0A0B4J2E5 919 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 CXorf65A6NEN9 183 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 GOLIM4O00461 696 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 THAP12O43422 761 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 LIASO43766 372 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 SP1P08047 785 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 SELENOVP59797 346 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 SEC61A1P61619 476 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 TRAF2Q12933 501 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 CBFBQ13951 182 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 PLCB4Q15147 1175 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 PWP2Q15269 919 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 KIF19Q2TAC6 998 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 MINDY4Q4G0A6 757 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms