RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 IWS1Q96ST2 819 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 CHCHD6Q9BRQ6 235 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 BRD8Q9H0E9 1235 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 LIN7CQ9NUP9 197 aaKnown RBP5.2□□□□□ -1.58
CD44-220ENST00000525688 TMEM160Q9NX00 188 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 NFKBIL1Q9UBC1 381 aaPredicted RBP5.2□□□□□ -1.58
CD44-220ENST00000525688 PI4KBQ9UBF8 816 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 ZNF142P52746 1687 aaPredicted RBP5.2□□□□□ -1.58
CD44-220ENST00000525688 NAIPQ13075 1403 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 UNC13BO14795 1591 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 CEP170BQ9Y4F5 1589 aaPredicted RBP5.2□□□□□ -1.58
CD44-220ENST00000525688 A2ML1A8K2U0 1454 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 ERVK-7P63135 1459 aa5.2□□□□□ -1.58
CD44-220ENST00000525688 EFCAB6Q5THR3 1501 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 FAM90A20PA6NIJ5 464 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 KIF28PB7ZC32 967 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TISP43B9A030 160 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 SPRY2O43597 315 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 FESP07332 822 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 CNPP09543 421 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 C1SP09871 688 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 ITGAMP11215 1152 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 CNTFP26441 200 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 KRT9P35527 623 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 UBE3AQ05086 875 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 CHRNDQ07001 517 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 EFEMP1Q12805 493 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 SF3A3Q12874 501 aaKnown RBP eCLIP5.19□□□□□ -1.58
CD44-220ENST00000525688 SEMA3BQ13214 749 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 PSMD6Q15008 389 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 RPS6KA2Q15349 733 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 CYP1B1Q16678 543 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TBRG1Q3YBR2 411 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 NRN1LQ496H8 165 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 GALNTL6Q49A17 601 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TTC31Q49AM3 519 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 GRHL2Q6ISB3 625 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 MTHFD1LQ6UB35 978 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TMCO3Q6UWJ1 677 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 BBS12Q6ZW61 710 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 NEK10Q6ZWH5 1172 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 USP51Q70EK9 711 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 RASGRP2Q7LDG7 609 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 MRGPREQ86SM8 312 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TMEM57Q8N5G2 664 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 RP9Q8TA86 221 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 SLC22A17Q8WUG5 538 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 HMGB4Q8WW32 186 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 CENPIQ92674 756 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 R3HDM4Q96D70 268 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TRIM44Q96DX7 344 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 MCRS1Q96EZ8 462 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 VPS50Q96JG6 964 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 PLEKHG4BQ96PX9 1271 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TWNKQ96RR1 684 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 ABCG4Q9H172 646 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 ABHD16BQ9H3Z7 469 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 SERHL2Q9H4I8 314 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 GOLGA2P5Q9HBQ8 144 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 ATP8A2Q9NTI2 1148 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TMLHEQ9NVH6 421 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 ARGLU1Q9NWB6 273 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 IFT80Q9P2H3 777 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 EPS15L1Q9UBC2 864 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 TESQ9UGI8 421 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 XPO7Q9UIA9 1087 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 PA2G4Q9UQ80 394 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 DERAQ9Y315 318 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 UBE2J1Q9Y385 318 aaPredicted RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 HFM1A2PYH4 1435 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 PLA2R1Q13018 1463 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 RPRD2Q5VT52 1461 aaKnown RBP5.19□□□□□ -1.58
CD44-220ENST00000525688 NLRP1Q9C000 1473 aa5.19□□□□□ -1.58
CD44-220ENST00000525688 NOS1P29475 1434 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 SLC38A8A6NNN8 435 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 MASP2O00187 686 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 PEX1O43933 1283 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 DLDP09622 509 aaKnown RBP5.18□□□□□ -1.58
CD44-220ENST00000525688 ZFXP17010 805 aaPredicted RBP5.18□□□□□ -1.58
CD44-220ENST00000525688 DRD1P21728 446 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 MMP8P22894 467 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 ADRA1DP25100 572 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 PCSK6P29122 969 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 MCM5P33992 734 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 CCR5P51681 352 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 CLCN2P51788 898 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 CTSWP56202 376 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 SUMO2P61956 95 aaKnown RBP5.18□□□□□ -1.58
CD44-220ENST00000525688 PPP2R5CQ13362 524 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 DNASE1L3Q13609 305 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 PKN2Q16513 984 aaKnown RBP5.18□□□□□ -1.58
CD44-220ENST00000525688 TXNRD1Q16881 649 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 AAK1Q2M2I8 961 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 HECTD3Q5T447 861 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 DGAT2L7PQ6IED9 249 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 RTL10Q7L3V2 364 aa5.18□□□□□ -1.58
CD44-220ENST00000525688 WDR53Q7Z5U6 358 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms