RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ARMCX3Q9UH62 379 aaPredicted RBP24.87■■□□□ 1.57
USP47-205ENST00000525257 M0QYV0 167 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 PMS1P54277 932 aaKnown RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 FKBP3Q00688 224 aaKnown RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 ANKRD40Q6AI12 368 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 DHRS13Q6UX07 377 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 USP30Q70CQ3 517 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 CARNMT1Q8N4J0 409 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 ZNF557Q8N988 423 aaPredicted RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 FIBINQ8TAL6 211 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 TTC17Q96AE7 1141 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 CCDC34Q96HJ3 373 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 LRIG1Q96JA1 1093 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 ZSWIM1Q9BR11 485 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 ACE2Q9BYF1 805 aaPredicted RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 IRX2Q9BZI1 471 aaPredicted RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 GDPD2Q9HCC8 539 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 RMND1Q9NWS8 449 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 FTSJ1Q9UET6 329 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 INTS6Q9UL03 887 aaKnown RBP24.86■■□□□ 1.57
USP47-205ENST00000525257 SCML1Q9UN30 329 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 PCDHB4Q9Y5E5 795 aa24.86■■□□□ 1.57
USP47-205ENST00000525257 TRIM49BA6NDI0 452 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 MID1O15344 667 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 RNASEH1O60930 286 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 CALCAP01258 141 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 PAEPP09466 180 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 BRD2P25440 801 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 GALCP54803 685 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 RPS24P62847 133 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 RACK1P63244 317 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 CAMK2BQ13554 666 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 SMAD1Q15797 465 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 CST6Q15828 149 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 HNRNPA1L2Q32P51 320 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 INAVAQ3KP66 663 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 PRAMEF14Q5SWL7 426 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 NCEH1Q6PIU2 408 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 MRGPRX3Q96LB0 322 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 MIS12Q9H081 205 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 SCUBE2Q9NQ36 999 aa24.85■■□□□ 1.57
USP47-205ENST00000525257 URB1O60287 2271 aaKnown RBP24.85■■□□□ 1.57
USP47-205ENST00000525257 A0A1W2PP55 124 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 A0A1W2PPC4 97 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 TYW5A2RUC4 315 aaKnown RBP24.84■■□□□ 1.57
USP47-205ENST00000525257 VILLO15195 856 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 ASLP04424 464 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 ZNF658Q5TYW1 1059 aaPredicted RBP24.84■■□□□ 1.57
USP47-205ENST00000525257 MMS22LQ6ZRQ5 1243 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 GATAD2AQ86YP4 633 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 AZIN2Q96A70 460 aa24.84■■□□□ 1.57
USP47-205ENST00000525257 FCRL2Q96LA5 508 aaPredicted RBP24.84■■□□□ 1.57
USP47-205ENST00000525257 GCN1Q92616 2671 aaKnown RBP24.84■■□□□ 1.57
USP47-205ENST00000525257 NYNRINQ9P2P1 1898 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 A0A1B0GTQ1 180 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 RNF225M0QZC1 329 aaPredicted RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 PAPSS1O43252 624 aaPredicted RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 DFNA5O60443 496 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 RNASEH2AO75792 299 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 CTSOP43234 321 aaPredicted RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 FMO5P49326 533 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 CDH18Q13634 790 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 CNGA2Q16280 664 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 FSCBQ5H9T9 825 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 MMAAQ8IVH4 418 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 CFAP52Q8N1V2 620 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 DQX1Q8TE96 717 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 KAT5Q92993 513 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 NT5C1BQ96P26 610 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 DDX50Q9BQ39 737 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 NUCKS1Q9H1E3 243 aaKnown RBP24.83■■□□□ 1.57
USP47-205ENST00000525257 NEUROG2Q9H2A3 272 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 EBF2Q9HAK2 575 aa24.83■■□□□ 1.57
USP47-205ENST00000525257 LRRC72A6NJI9 287 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 TTC34A8MYJ7 566 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 MOCS2O96007 188 aaPredicted RBP24.82■■□□□ 1.56
USP47-205ENST00000525257 WNT1P04628 370 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 SFSWAPQ12872 951 aaKnown RBP24.82■■□□□ 1.56
USP47-205ENST00000525257 COBLL1Q53SF7 1204 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 PITRM1Q5JRX3 1037 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 C9orf64Q5T6V5 341 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 CCDC117Q8IWD4 279 aaPredicted RBP24.82■■□□□ 1.56
USP47-205ENST00000525257 PPM1KQ8N3J5 372 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 PDCD7Q8N8D1 485 aaKnown RBP24.82■■□□□ 1.56
USP47-205ENST00000525257 ADAM32Q8TC27 787 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 SERPINB11Q96P15 392 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 ELF4Q99607 663 aaPredicted RBP24.82■■□□□ 1.56
USP47-205ENST00000525257 OMDQ99983 421 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 AASDHPPTQ9NRN7 309 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 ERVW-1Q9UQF0 538 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 ATP6V1DQ9Y5K8 247 aa24.82■■□□□ 1.56
USP47-205ENST00000525257 FBXO21O94952 628 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 FYNP06241 537 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 PSMD8P48556 350 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 LRRC63Q05C16 580 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 STILQ15468 1287 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 DCAF6Q58WW2 860 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 MS4A13Q5J8X5 152 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 OR2T34Q8NGX1 318 aa24.81■■□□□ 1.56
USP47-205ENST00000525257 ERCC4Q92889 916 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms