RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 F9P00740 461 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ABHD2P08910 425 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PDGFRBP09619 1106 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PTPN2P17706 415 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ATF6P18850 670 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 IVDP26440 423 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 IL1R2P27930 398 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 FLT3P36888 993 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 HSD17B3P37058 310 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SSR1P43307 286 aaKnown RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 RPL21P46778 160 aaKnown RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 TSPY1Q01534 308 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SIGLEC14Q08ET2 396 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SCAPQ12770 1279 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 MTA1Q13330 715 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PLD1Q13393 1074 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ORC1Q13415 861 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 TDGQ13569 410 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 HTR4Q13639 388 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 TEAD2Q15562 447 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 MGAT5BQ3V5L5 792 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 CCDC14Q49A88 953 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 INTS6LQ5JSJ4 861 aaKnown RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 STXBP5Q5T5C0 1151 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 AGBL2Q5U5Z8 902 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SLC9A4Q6AI14 798 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PM20D1Q6GTS8 502 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 AADACL2Q6P093 401 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 CLEC20AQ6ZU45 233 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PDZD4Q76G19 769 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 FAM35AQ86V20 835 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 CPNE8Q86YQ8 564 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 TMC8Q8IU68 726 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SIX6OS1Q8N1H7 587 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ELMOD1Q8N336 334 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 SLC44A3Q8N4M1 653 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ZCCHC9Q8N567 271 aaKnown RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 ARFGAP2Q8N6H7 521 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 KCTD6Q8NC69 237 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 UBA3Q8TBC4 463 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 LRRN4Q8WUT4 740 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 RAPGEF5Q92565 580 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PGM2Q96G03 612 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ZNF512Q96ME7 567 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 ZSWIM3Q96MP5 696 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 TTC25Q96NG3 672 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PKMYT1Q99640 499 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 TRIM51Q9BSJ1 452 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 PLA2G2FQ9BZM2 168 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ROPN1BQ9BZX4 212 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 DPEP3Q9H4B8 488 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ROPN1Q9HAT0 212 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 POPDC2Q9HBU9 364 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 LRRC4Q9HBW1 653 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 DMAP1Q9NPF5 467 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 FAM49BQ9NUQ9 324 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 EVA1BQ9NVM1 165 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS11-201ENST00000524454 FETUBQ9UGM5 382 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 ASIC3Q9UHC3 531 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 CA14Q9ULX7 337 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 NFS1Q9Y697 457 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 GREB1Q4ZG55 1949 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 NCOR1O75376 2440 aa7.32□□□□□ -1.24
VPS11-201ENST00000524454 NUP210Q8TEM1 1887 aaPredicted RBP7.32□□□□□ -1.24
VPS11-201ENST00000524454 ZNF638Q14966 1978 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 A0A1W2PRU2 124 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 GOLGA6CA6NDK9 693 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 HACD1B0YJ81 288 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 H3BQF6 201 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 DNALI1O14645 258 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 TP73O15350 636 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 COL4A2P08572 1712 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM153BP0C7A2 387 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 MYZAPP0CAP1 466 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 GOLGA6DP0CG33 693 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 CCDC130P13994 396 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 CYP2F1P24903 491 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 MAGEA11P43364 429 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 ALDH1A3P47895 512 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 HCAR3P49019 387 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 RPIAP49247 311 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 PMS2P54278 862 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 EPHB3P54753 998 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 HDAC4P56524 1084 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 DAOAP59103 153 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 CYP4F8P98187 520 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 DHX9Q08211 1270 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 ADCY2Q08462 1091 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 DPYSL3Q14195 570 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 GRM2Q14416 872 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 NOMO1Q15155 1222 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 RASA2Q15283 850 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 TERF2Q15554 542 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 UAP1Q16222 522 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 NFE2Q16621 373 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 DDR2Q16832 855 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM153CQ494X1 144 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms