RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SLC18A1	P54219	525 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	NRL	P54845	237 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	PITX1	P78337	314 aa	Predicted RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ELAVL2	Q12926	359 aa	Known RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	NAB1	Q13506	487 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	QPCT	Q16769	361 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	PARP6	Q2NL67	630 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	KBTBD12	Q3ZCT8	623 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	CTXN3	Q4LDR2	81 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ADGRD1	Q6QNK2	874 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	PID1	Q7Z2X4	250 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	SPATA21	Q7Z572	469 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ZNF598	Q86UK7	904 aa	Known RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	SLC26A11	Q86WA9	606 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	RASSF3	Q86WH2	238 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	LRRC6	Q86X45	466 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ATPAF2	Q8N5M1	289 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ZMIZ2	Q8NF64	920 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	OR10T2	Q8NGX3	314 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	DQX1	Q8TE96	717 aa	Known RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	MAML1	Q92585	1016 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	TBC1D31	Q96DN5	1066 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	MTBP	Q96DY7	904 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	P2RY11	Q96G91	374 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	APOPT1	Q96IL0	206 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	SERPINB11	Q96P15	392 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	VAT1	Q99536	393 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	LGMN	Q99538	433 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	PRDM12	Q9H4Q4	367 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	TBC1D13	Q9NVG8	400 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	FGFR1OP2	Q9NVK5	253 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	TRHDE	Q9UKU6	1024 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	PHF24	Q9UPV7	400 aa		11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	USP15	Q9Y4E8	981 aa	Predicted RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	COL4A4	P53420	1690 aa	Predicted RBP	11.07	□□□□□ -0.64
SPIDR-222	ENST00000524006	SDR42E2	A6NKP2	422 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	OR6C75	A6NL08	312 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	ERI2	A8K979	691 aa	Known RBP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	HHLA1	C9JL84	531 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006		H7C4K7	107 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	COPE	O14579	308 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	DCLK1	O15075	740 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	METTL18	O95568	372 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SNRPA	P09012	282 aa	Known RBP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	TROVE2	P10155	538 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PGAM1	P18669	254 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	CNTF	P26441	200 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PSMB4	P28070	264 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	ALDH3A1	P30838	453 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	CCR1	P32246	355 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	MAGEA9	P43362	315 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	CACNA2D1	P54289	1103 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SESN2	P58004	480 aa	Predicted RBP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SLC10A2	Q12908	348 aa	Predicted RBP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PM20D1	Q6GTS8	502 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	BEND5	Q7L4P6	421 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	CEP57	Q86XR8	500 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	TRIM42	Q8IWZ5	723 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	MICALL1	Q8N3F8	863 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PIP4P2	Q8N4L2	257 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	DNAAF3	Q8N9W5	541 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	LRRN4	Q8WUT4	740 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	DCAKD	Q8WVC6	231 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SLC44A1	Q8WWI5	657 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	EBNA1BP2	Q99848	306 aa	Known RBP	11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	RTP3	Q9BQQ7	232 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	ADAM33	Q9BZ11	813 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PITPNM3	Q9BZ71	974 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SIK2	Q9H0K1	926 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	SMOC2	Q9H3U7	446 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	EURL	Q9NYK6	297 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	DONSON	Q9NYP3	566 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	KLHL14	Q9P2G3	628 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	OR12D3	Q9UGF7	316 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	ARL2BP	Q9Y2Y0	163 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	MFHAS1	Q9Y4C4	1052 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	TTLL3	Q9Y4R7	772 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	PCDHA11	Q9Y5I1	949 aa		11.06	□□□□□ -0.64
SPIDR-222	ENST00000524006	FOXO6	A8MYZ6	492 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	TRIM49D1	C9J1S8	452 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	DFFA	O00273	331 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	IRAK2	O43187	625 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	AVIL	O75366	819 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	RTN3	O95197	1032 aa	Predicted RBP	11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	CREB1	P16220	341 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	GCA	P28676	217 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	LIG3	P49916	1009 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	TTC3	P53804	2025 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	ARPP19	P56211	112 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	PPID	Q08752	370 aa	Known RBP	11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	SETDB1	Q15047	1291 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	CLLU1OS	Q5K130	101 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	TIGD7	Q6NT04	549 aa	Predicted RBP	11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	LRRC8B	Q6P9F7	803 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	LVRN	Q6Q4G3	990 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	BNIPL	Q7Z465	357 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	COLGALT2	Q8IYK4	626 aa		11.05	□□□□□ -0.64
SPIDR-222	ENST00000524006	NUP93	Q8N1F7	819 aa		11.05	□□□□□ -0.64

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