RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DPYSL2Q16555 572 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 DDR2Q16832 855 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 LMNTD2Q8IXW0 634 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 ARRDC4Q8NCT1 418 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 PIGVQ9NUD9 493 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 TRMT13Q9NUP7 481 aaKnown RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 SSX2IPQ9Y2D8 614 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 CXorf49A8MYA2 514 aaPredicted RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 TPP1O14773 563 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 GIPC1O14908 333 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 NCAM2O15394 837 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 PRPF4O43172 522 aaKnown RBP eCLIP10.41□□□□□ -0.74
MCF2-209ENST00000520602 GP5P40197 560 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 BST1Q10588 318 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 ITGA9Q13797 1035 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 TDRPQ86YL5 185 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 IFNL1Q8IU54 200 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 PSTKQ8IV42 348 aaKnown RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 SCAMP5Q8TAC9 235 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 ELMO2Q96JJ3 720 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 THTPAQ9BU02 230 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 SLC17A6Q9P2U8 582 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 MID2Q9UJV3 735 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 MYADML2A6NDP7 307 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 TXNDC9O14530 226 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 ADCY6O43306 1168 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 MOGSQ13724 837 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 RASA2Q15283 850 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 C1orf146Q5VVC0 180 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 BHMTQ93088 406 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 FAM136AQ96C01 138 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 NT5MQ9NPB1 228 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 FBXO6Q9NRD1 293 aaPredicted RBP10.41□□□□□ -0.74
MCF2-209ENST00000520602 PCDHB7Q9Y5E2 793 aa10.41□□□□□ -0.74
MCF2-209ENST00000520602 SLC12A8A0AV02 714 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 DPYSL4O14531 572 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 DNAJC8O75937 253 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 ANXA9O76027 345 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 VAPBO95292 243 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ATP6V1G2O95670 118 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 PFKMP08237 780 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ALADP13716 330 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 KCNE1P15382 129 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 WARSP23381 471 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 ELF1P32519 619 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 RPL9P32969 192 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 DAOAP59103 153 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 IL31Q6EBC2 164 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 TRNP1Q6NT89 227 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 N4BP2L2Q92802 583 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 RMDN1Q96DB5 314 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 QKIQ96PU8 341 aaKnown RBP eCLIP10.4□□□□□ -0.74
MCF2-209ENST00000520602 TTC1Q99614 292 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 MPP6Q9NZW5 540 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 DCDC2Q9UHG0 476 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 FZD10Q9ULW2 581 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 PCDHA11Q9Y5I1 949 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 FCHO1O14526 889 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 TOMM70O94826 608 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 F7P08709 466 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 NCALDP61601 193 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CDK16Q00536 496 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 PRKCZQ05513 592 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ITGA7Q13683 1181 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 RPS6KA2Q15349 733 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ANO4Q32M45 955 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 MMEL1Q495T6 779 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CERCAMQ5T4B2 595 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CMC1Q7Z7K0 106 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ZNF567Q8N184 647 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 KBTBD7Q8WVZ9 684 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 HDAC11Q96DB2 347 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 BEGAINQ9BUH8 593 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 RRN3Q9NYV6 651 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 UBA6A0AVT1 1052 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 STAU1O95793 577 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 RALBP11234 206 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CPA3P15088 417 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 TUSC3Q13454 348 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 OLIG2Q13516 323 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 NFE2Q16621 373 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 NCBP2-AS2Q69YL0 99 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 C6orf89Q6UWU4 347 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 LINC00523Q86TU6 105 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 KCNMB4Q86W47 210 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 SMG8Q8ND04 991 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 TTC8Q8TAM2 541 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CERS2Q96G23 380 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms