RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 LENG9Q96B70 501 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 ERP27Q96DN0 273 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 EDC3Q96F86 508 aaKnown RBP8.11□□□□□ -1.11
LSM1-202ENST00000520286 C8orf49Q96NF6 230 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 PLEKHG4BQ96PX9 1271 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 SNX18Q96RF0 628 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 CD180Q99467 661 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 WDR11Q9BZH6 1224 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 VEZTQ9HBM0 779 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 SERTAD4Q9NUC0 356 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 KDM6BO15054 1643 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 SHROOM2Q13796 1616 aa8.11□□□□□ -1.11
LSM1-202ENST00000520286 A0A0G2JLL6 359 aaPredicted RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 TIPRLO75663 272 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 URI1O94763 535 aaPredicted RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 KAT7O95251 611 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 PEX11BO96011 259 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 NPSP0C0P6 89 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 PTGS2P35354 604 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 SETQ01105 290 aaPredicted RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 TMEM88Q6PEY1 159 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 ATF7IPQ6VMQ6 1270 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 KYAT3Q6YP21 454 aaKnown RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 CPLX4Q7Z7G2 160 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 DIS3L2Q8IYB7 885 aaKnown RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 SRFBP1Q8NEF9 429 aaKnown RBP8.1□□□□□ -1.11
LSM1-202ENST00000520286 NFKBIDQ8NI38 313 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 KCNG4Q8TDN1 519 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 RNFT2Q96EX2 444 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 HTATIP2Q9BUP3 242 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 CTDSP1Q9GZU7 261 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 USP44Q9H0E7 712 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 SLC25A18Q9H1K4 315 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 MTMR4Q9NYA4 1195 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 GPR34Q9UPC5 381 aa8.1□□□□□ -1.11
LSM1-202ENST00000520286 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 FAM90A7PA6NKC0 464 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 NPIPB5A8MRT5 1133 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 FAM90A22PA8MWA6 464 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 FAM90A12PA8MX19 464 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 FAM90A23PA8MXZ1 464 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 QSOX1O00391 747 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 C1SP09871 688 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 NDUFB7P17568 137 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 IGFBP2P18065 325 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 FPR3P25089 353 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 SLC8A1P32418 973 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 STAT1P42224 750 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 AGTR2P50052 363 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 ARF3P61204 181 aaPredicted RBP8.09□□□□□ -1.11
LSM1-202ENST00000520286 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
LSM1-202ENST00000520286 PLP2Q04941 152 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 MEA1Q16626 185 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 SPDYAQ5MJ70 313 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 KCNV1Q6PIU1 500 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 RHOUQ7L0Q8 258 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 ADGRG6Q86SQ4 1221 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 NGEFQ8N5V2 710 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 BEND2Q8NDZ0 799 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 PROKR1Q8TCW9 393 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 SH3KBP1Q96B97 665 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 ELP4Q96EB1 424 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 RSRC1Q96IZ7 334 aaKnown RBP8.09□□□□□ -1.11
LSM1-202ENST00000520286 CDK5RAP1Q96SZ6 601 aaKnown RBP8.09□□□□□ -1.11
LSM1-202ENST00000520286 FSD1LQ9BXM9 530 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 PPP1R14DQ9NXH3 145 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 SLC25A10Q9UBX3 287 aaPredicted RBP8.09□□□□□ -1.11
LSM1-202ENST00000520286 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 ADAMTS5Q9UNA0 930 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 DIP2BQ9P265 1576 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 HECW2Q9P2P5 1572 aa8.09□□□□□ -1.11
LSM1-202ENST00000520286 H0YIZ8 118 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 DOK2O60496 412 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 METTL18O95568 372 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 HSPA1AP0DMV8 641 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 HSPA1BP0DMV9 641 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 EPHA8P29322 1005 aaPredicted RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 MVDP53602 400 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 CDH15P55291 814 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 NUCB1Q02818 461 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 ALKBH1Q13686 389 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 NAA25Q14CX7 972 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 TBCEQ15813 527 aaPredicted RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 GPR162Q16538 588 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 ANKRD16Q6P6B7 361 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 INO80CQ6PI98 192 aaPredicted RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 SLC39A5Q6ZMH5 540 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 Q6ZNX1 250 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 LAS2Q8IYD9 372 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 RFWD2Q8NHY2 731 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 AKAP1Q92667 903 aaKnown RBP eCLIP8.08□□□□□ -1.12
LSM1-202ENST00000520286 NUDT16L1Q9BRJ7 211 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 TTYH1Q9H313 450 aaPredicted RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 BEX4Q9NWD9 120 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms