RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 KREMEN2Q8NCW0 462 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 CCNYQ8ND76 341 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 VAT1Q99536 393 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 ZYG11BQ9C0D3 744 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 PABPC3Q9H361 631 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 PRDM12Q9H4Q4 367 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 NEU3Q9UQ49 428 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 MFHAS1Q9Y4C4 1052 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 SNX10Q9Y5X0 201 aa15.5■□□□□ 0.07
TRAPPC9-205ENST00000518839 IGLV3-10A0A075B6K4 115 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 A0A0A0MRY4 1105 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 C2orf71A6NGG8 1288 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 COCHO43405 550 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 OPHN1O60890 802 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 MAP3K6O95382 1288 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 FGF19O95750 216 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 LATS1O95835 1130 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 OAS1P00973 400 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 C8AP07357 584 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 FDFT1P37268 417 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 GARSP41250 739 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 SLC11A2P49281 568 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 BASP1P80723 227 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 AP1B1Q10567 949 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 AUHQ13825 339 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 KCTD19Q17RG1 926 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 PLPP4Q5VZY2 271 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 ARHGEF18Q6ZSZ5 1173 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 CENPUQ71F23 418 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 CCDC25Q86WR0 208 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 NAT8LQ8N9F0 302 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 CPT1BQ92523 772 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 PRCCQ92733 491 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 SPATA13Q96N96 652 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 GCNAQ96QF7 691 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 TGS1Q96RS0 853 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 DDX50Q9BQ39 737 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 ALG13Q9NP73 1137 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 DPP7Q9UHL4 492 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 NUP205Q92621 2012 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 SHROOM3Q8TF72 1996 aa15.49■□□□□ 0.07
TRAPPC9-205ENST00000518839 ACSL4O60488 711 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 F11P03951 625 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 NUDT17P0C025 328 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 VAV1P15498 845 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 CDC25CP30307 473 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 GGCXP38435 758 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 MAGEA6P43360 314 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 ARL4CP56559 192 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 UAP1Q16222 522 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 DENND2CQ68D51 928 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 ELMSAN1Q6PJG2 1045 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 CHSY1Q86X52 802 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 CCDC13Q8IYE1 715 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 ZNF683Q8IZ20 524 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 NPWQ8N729 165 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 MICAL1Q8TDZ2 1067 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 EXOC4Q96A65 974 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 P2RY11Q96G91 374 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 TTC25Q96NG3 672 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 ZIM3Q96PE6 472 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 TSGA13Q96PP4 275 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 LGMNQ99538 433 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 C17orf80Q9BSJ5 609 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 RAB6BQ9NRW1 208 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 TMEM248Q9NWD8 314 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 XPO7Q9UIA9 1087 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 TRHDEQ9UKU6 1024 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 PLAAQ9Y263 795 aa15.48■□□□□ 0.07
TRAPPC9-205ENST00000518839 DRGXA6NNA5 263 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 F5H5T6 163 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 HMBSP08397 361 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 TPSB2P20231 275 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 TACR2P21452 398 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CCNCP24863 283 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 HOXA9P31269 272 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CHKAP35790 457 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 NDST2P52849 883 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ERVK-21P61565 698 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CDK16Q00536 496 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CBLBQ13191 982 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 KCNJ11Q14654 390 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 TPSAB1Q15661 275 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 HIF1AQ16665 826 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 PPM1LQ5SGD2 360 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ANKRD20A2Q5SQ80 823 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ANKRD20A1Q5TYW2 823 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ANKRD20A3Q5VUR7 823 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ITPRIPL1Q6GPH6 555 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 TIGD7Q6NT04 549 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 C14orf80Q86SX3 495 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 ATPAF2Q8N5M1 289 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CCDC110Q8TBZ0 833 aa15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 PRMT1Q99873 361 aaKnown RBP15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 KLF16Q9BXK1 252 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-205ENST00000518839 CDC42EP4Q9H3Q1 356 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms