RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 AXLP30530 894 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HOXA13P31271 388 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DNM2P50570 870 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NUDT6P53370 316 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GYS2P54840 703 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SELENOVP59797 346 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPP2R2AP63151 447 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CFHR3Q02985 330 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LRRC63Q05C16 580 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZBTB17Q13105 803 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HNF4GQ14541 408 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C16orf72Q14CZ0 275 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CTU2Q2VPK5 515 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SV2CQ496J9 727 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C2CD6Q53TS8 623 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CCNYL2Q5T2Q4 361 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FBXW10Q5XX13 1052 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SFRP4Q6FHJ7 346 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RBM44Q6ZP01 1051 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC16A12Q6ZSM3 486 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 Q6ZSV7 163 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMC4Q7Z404 712 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ARHGAP22Q7Z5H3 698 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C11orf96Q7Z7L8 435 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PROSER2Q86WR7 435 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MMAAQ8IVH4 418 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DDIASQ8IXT1 998 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZC3H3Q8IXZ2 948 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 AHI1Q8N157 1196 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SIRT6Q8N6T7 355 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DDHD1Q8NEL9 900 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC24A4Q8NFF2 622 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 OR6P1Q8NGX9 317 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 OR2T6Q8NHC8 308 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TYMSOSQ8TAI1 123 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LNX1Q8TBB1 728 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DEDD2Q8WXF8 326 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CPT1BQ92523 772 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PIGKQ92643 395 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BADQ92934 168 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NUS1Q96E22 293 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 P2RY11Q96G91 374 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BCANQ96GW7 911 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SERAC1Q96JX3 654 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HS6ST2Q96MM7 605 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 COL21A1Q96P44 957 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LRRC61Q9BV99 259 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BOCQ9BWV1 1114 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GZF1Q9H116 711 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SMOC2Q9H3U7 446 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PIF1Q9H611 641 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SGK2Q9HBY8 427 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RETNQ9HD89 108 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC52A3Q9NQ40 469 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPANQ9NQ55 473 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LANCL2Q9NS86 450 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ABCF3Q9NUQ8 709 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KLHL8Q9P2G9 620 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TBC1D14Q9P2M4 693 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BIN2Q9UBW5 565 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZDHHC8Q9ULC8 765 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RAB26Q9ULW5 256 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 THRAP3Q9Y2W1 955 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RAD54BQ9Y620 910 aa-0.6□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SHANK1Q9Y566 2161 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGHV3OR16-10A0A075B7F0 116 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 A0A087WUV0 522 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGKV3D-11A0A0A0MRZ8 115 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGKV1D-43A0A0B4J1Z2 117 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 A0A0U1RQJ8 604 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SMIM1B2RUZ4 78 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMEM178BH3BS89 294 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PANO1I0J062 215 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CLIC1O00299 241 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 POLRMTO00411 1230 aaKnown RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CAPN9O14815 690 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GPRIN2O60269 458 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PRPF40AO75400 957 aaKnown RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PMS2P2O95744 297 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SRGAP2CP0DJJ0 459 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ERVK-10P10266 1014 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BCL3P20749 454 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FPR1P21462 350 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CHATP28329 748 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HOXC8P31273 242 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC6A4P31645 630 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 WNT5AP41221 380 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FUT6P51993 359 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KIF11P52732 1056 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PMS2P54278 862 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CASP7P55210 303 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SUMO2P61956 95 aaKnown RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PITX1P78337 314 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PLCB2Q00722 1185 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SP2Q02086 613 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPARAQ07869 468 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC20A2Q08357 652 aa-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ELAVL2Q12926 359 aaKnown RBP-0.61□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GBX1Q14549 363 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms