RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 MBD3L5A6NJ08 208 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 M0R3H8 397 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 EXOC5O00471 708 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ARHGEF9O43307 516 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 LDB2O43679 373 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 SERPINI2O75830 405 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 UNC5CO95185 931 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 IGLV1-44P01699 117 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ALDH2P05091 517 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 SRCP12931 536 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 CHRNB2P17787 502 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 UBA1P22314 1058 aaKnown RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ID4P47928 161 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 MTNR1BP49286 362 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 LIMK2P53671 638 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 SLC5A3P53794 718 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 TMPRSS3P57727 454 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 EXOSC9Q06265 439 aaKnown RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 DUSP6Q16828 381 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZNF284Q2VY69 593 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 SETMARQ53H47 684 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 TAF1BQ53T94 588 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ENTPD8Q5MY95 495 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 HIBCHQ6NVY1 386 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 DHRS13Q6UX07 377 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 METTL7BQ6UX53 244 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 MIGA2Q7L4E1 593 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 SERINC5Q86VE9 423 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 RAB11FIP4Q86YS3 637 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 C11orf44Q8N8P7 122 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 MIGA1Q8NAN2 632 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 OR10V1Q8NGI7 309 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 MBD3L2Q8NHZ7 208 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 BPIFB1Q8TDL5 484 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 TAAR8Q969N4 342 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZNF419Q96HQ0 510 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZNF668Q96K58 619 aaPredicted RBP0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 C17orf77Q96MU5 243 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ASCL2Q99929 193 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 ANAPC11Q9NYG5 84 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 CALCOCO1Q9P1Z2 691 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 RASAL2Q9UJF2 1139 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 PHTF1Q9UMS5 762 aa0.12□□□□□ -2.39
RNU6-557P-201ENST00000516842 GREB1LQ9C091 1923 aaPredicted RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 FOXO6A8MYZ6 492 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 HHLA1C9JL84 531 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 J3KR12 359 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 AGPSO00116 658 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 PRPH2P23942 346 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 EDNRBP24530 442 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 C21orf33P30042 268 aaPredicted RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 LRPAP1P30533 357 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 AGFG1P52594 562 aaKnown RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 TIRAPP58753 221 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 C21orf62-AS1Q17RA5 79 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZFP69Q49AA0 526 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 DCST1Q5T197 706 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 CNNM4Q6P4Q7 775 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 DSG4Q86SJ6 1040 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 PPP1R3BQ86XI6 285 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 CPA6Q8N4T0 437 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 JMYQ8N9B5 988 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 DMBX1Q8NFW5 382 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 DNAJB14Q8TBM8 379 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZIM3Q96PE6 472 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 PUS7Q96PZ0 661 aaKnown RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 VN1R3Q9BXE9 311 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 EPS8L2Q9H6S3 715 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 SAP30LQ9HAJ7 183 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 GNL3LQ9NVN8 582 aaKnown RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 XPR1Q9UBH6 696 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 CACNG5Q9UF02 275 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 CPA4Q9UI42 421 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 RARRES3Q9UL19 164 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 SPATA31A1Q5TZJ5 1347 aa0.11□□□□□ -2.39
RNU6-557P-201ENST00000516842 SGTAO43765 313 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 IGKV3-11P04433 115 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 GRPP07492 148 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 XRCC6P12956 609 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 TRIM27P14373 513 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 HDCP19113 662 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 SMARCA1P28370 1054 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CHRNB4P30926 498 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 UQCRC1P31930 480 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 GPR3P46089 330 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CCR10P46092 362 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 ZNF84P51523 738 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 BCAT1P54687 386 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 TXNL4AP83876 142 aaKnown RBP0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CCDC15Q0P6D6 951 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CCNIQ14094 377 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 XKR9Q5GH70 373 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CERCAMQ5T4B2 595 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 LRIG3Q6UXM1 1119 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CEACAM20Q6UY09 585 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 KDELC2Q7Z4H8 507 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 DDX42Q86XP3 938 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 PARP8Q8N3A8 854 aa0.1□□□□□ -2.39
RNU6-557P-201ENST00000516842 CNBD1Q8NA66 436 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms