RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	EOMES	O95936	686 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	C1QTNF8	P60827	252 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	YWHAG	P61981	247 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	AP1B1	Q10567	949 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	LRRC26	Q2I0M4	334 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	DENND5B	Q6ZUT9	1274 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	DEPDC1B	Q8WUY9	529 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	CFAP36	Q96G28	342 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	TTC25	Q96NG3	672 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	SLC2A13	Q96QE2	648 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	WDR6	Q9NNW5	1121 aa	Known RBP	10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	RABGEF1	Q9UJ41	708 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	GGA2	Q9UJY4	613 aa		10.84	□□□□□ -0.67
CDK18-222	ENST00000515494	GOLGA8R	I6L899	631 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	TCEA3	O75764	348 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	VIM	P08670	466 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ABHD2	P08910	425 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ADRA1B	P35368	520 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	GPR15	P49685	360 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	FAM189B	P81408	668 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	SLC45A4	Q5BKX6	768 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ANKRD20A2	Q5SQ80	823 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ANKRD20A1	Q5TYW2	823 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ANKRD20A3	Q5VUR7	823 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	NUGGC	Q68CJ6	796 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	BHLHA9	Q7RTU4	235 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	LRRC34	Q8IZ02	419 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	TTC9B	Q8N6N2	239 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ANKS4B	Q8N8V4	417 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ZNF333	Q96JL9	665 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	PAK5	Q9P286	719 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	SQOR	Q9Y6N5	450 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	BCLAF3	A2AJT9	711 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	KCNK1	O00180	336 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ZNF189	O75820	626 aa	Predicted RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	DNAJC8	O75937	253 aa	Predicted RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ABL2	P42684	1182 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	SLC11A1	P49279	550 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	SPOUT1	Q5T280	376 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	BSPRY	Q5W0U4	402 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	HEATR6	Q6AI08	1181 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	TAS1R1	Q7RTX1	841 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ATP11C	Q8NB49	1132 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	MIPOL1	Q8TD10	442 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	ACBD6	Q9BR61	282 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	FTHL17	Q9BXU8	183 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	C12orf65	Q9H3J6	166 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	CNGB3	Q9NQW8	809 aa		10.83	□□□□□ -0.68
CDK18-222	ENST00000515494	hCG_2014768	A0A024R1R8	64 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	EEF2K	O00418	725 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CSF2RA	P15509	400 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	RPL17	P18621	184 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	EFHC2	Q5JST6	749 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	RAB41	Q5JT25	222 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	FAM171B	Q6P995	826 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	LONP2	Q86WA8	852 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	ATAD1	Q8NBU5	361 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CHMP6	Q96FZ7	201 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CASD1	Q96PB1	797 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	PRDM12	Q9H4Q4	367 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	RHBDL2	Q9NX52	303 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	LGALS13	Q9UHV8	139 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	SLC27A5	Q9Y2P5	690 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	GRIK1	P39086	918 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CRADD	P78560	199 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	OLIG2	Q13516	323 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	DDR2	Q16832	855 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	PRPF39	Q86UA1	669 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CAND1	Q86VP6	1230 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	MPP5	Q8N3R9	675 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	RNF34	Q969K3	372 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	NAF1	Q96HR8	494 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	SUSD3	Q96L08	255 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	ZNF317	Q96PQ6	595 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	UBE2O	Q9C0C9	1292 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	KLC2	Q9H0B6	622 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494		E7ESA3	106 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494		M0QZQ0	153 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	DRD4	P21917	467 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	PAX3	P23760	479 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	DSC1	Q08554	894 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	ZRSR2	Q15696	482 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CEP128	Q6ZU80	1094 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	RFX8	Q6ZV50	586 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	THEM5	Q8N1Q8	247 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	DNAJC5G	Q8N7S2	189 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	PAFAH2	Q99487	392 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	COLEC11	Q9BWP8	271 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	SIK2	Q9H0K1	926 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	MAD1L1	Q9Y6D9	718 aa		10.82	□□□□□ -0.68
CDK18-222	ENST00000515494	TCRBV9S1A1T	A0A576	114 aa		10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	PITPNM1	O00562	1244 aa		10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	HGS	O14964	777 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	MSI1	O43347	362 aa	Known RBP	10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	PFDN1	O60925	122 aa		10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	FAM155B	O75949	473 aa		10.81	□□□□□ -0.68
CDK18-222	ENST00000515494	ALDH2	P05091	517 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms