RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GOLGA8QA0A0J9YX86 632 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GOLGA8OA6NCC3 632 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GOLGA8NF8WBI6 632 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GCATO75600 419 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 LYPLA2O95372 231 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CFHP08603 1231 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GARTP22102 1010 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 MYF6P23409 242 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 PSMD8P48556 350 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SIK1P57059 783 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CLDN10P78369 228 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 OGDHQ02218 1023 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 OXA1LQ15070 435 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 PHKG1Q16816 387 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 XKR5Q6UX68 686 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CNTD1Q8N815 330 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 ANKFN1Q8N957 763 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TFAP2CQ92754 450 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 YTHDF1Q9BYJ9 559 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 DYTNA2CJ06 578 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 SLC15A5A6NIM6 579 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 KLHL41O60662 606 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 IL1R1P14778 569 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 HOXD10P28358 340 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 GABRB3P28472 473 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 RARRES1P49788 294 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 TMBIM6P55061 237 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 CDH15P55291 814 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PEX3P56589 373 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 CTBSQ01459 385 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 RHDQ02161 417 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 GALNT2Q10471 571 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 NOMO1Q15155 1222 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 AARS2Q5JTZ9 985 aaKnown RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 TMEM270Q6UE05 265 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 FAM47BQ8NA70 645 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 GRIN3AQ8TCU5 1115 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 FNIP1Q8TF40 1166 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 ACSF2Q96CM8 615 aaPredicted RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 RTP4Q96DX8 246 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 EBNA1BP2Q99848 306 aaKnown RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 C8orf4Q9NR00 106 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PCDHA11Q9Y5I1 949 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 AVILO75366 819 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 STAM2O75886 525 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PTPN1P18031 435 aaKnown RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 SLC7A1P30825 629 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 SERPINB5P36952 375 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 NME5P56597 212 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PICALMQ13492 652 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 ZACNQ401N2 412 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 FAM47CQ5HY64 1035 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 MYO1HQ8N1T3 1032 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PNPT1Q8TCS8 783 aaKnown RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
SMAD1-215ENST00000515385 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 PLAC1Q9HBJ0 212 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
SMAD1-215ENST00000515385 CFLARO15519 480 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 AKAP10O43572 662 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 HSPA4LO95757 839 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 HSPA8P11142 646 aaKnown RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 CCNA2P20248 432 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 PSMA2P25787 234 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 ITGADQ13349 1161 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 TFDP2Q14188 446 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 CYP2A13Q16696 494 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms