RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 UVRAGQ9P2Y5 699 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 IFT52Q9Y366 437 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 GOLGA8QA0A0J9YX86 632 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TLDC2A0PJX2 215 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 GOLGA8OA6NCC3 632 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 FADS2P1A8MWK0 482 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 GOLGA8NF8WBI6 632 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 AQP9O43315 295 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 LILRB3O75022 631 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 IL33O95760 270 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 FUCA1P04066 466 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 CFHP08603 1231 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 CHRNA3P32297 505 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ARL2P36404 184 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 RPL21P46778 160 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 SLC9A3P48764 834 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 RHAGQ02094 409 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TRAP1Q12931 704 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 NPTX1Q15818 432 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF124Q15973 351 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 XKR3Q5GH77 459 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TREML2Q5T2D2 321 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ENDOVQ8N8Q3 282 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 FBXO25Q8TCJ0 367 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TMEM143Q96AN5 459 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ZBTB45Q96K62 511 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 FAM167AQ96KS9 214 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 FMO2Q99518 471 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 HERPUD2Q9BSE4 406 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 UNKQ9C0B0 810 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 PORCNQ9H237 461 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 RAD21L1Q9H4I0 556 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 APOBEC3GQ9HC16 384 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 INTS9Q9NV88 658 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 CNOT8Q9UFF9 292 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 CPSF3Q9UKF6 684 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 OR6C65A6NJZ3 312 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 XPO1O14980 1071 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 PIGNO95427 931 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 IFNA14P01570 189 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ICAM2P13598 275 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 ERFP50548 548 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 MRPS5P82675 430 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 RBM44Q6ZP01 1051 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 SLC13A5Q86YT5 568 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 GTF3C2Q8WUA4 911 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 KLHL25Q9H0H3 589 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 STMN3Q9NZ72 180 aa7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 RPH3AQ9Y2J0 694 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-219ENST00000514743 UMODL1Q5DID0 1318 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 CNTNAP2Q9UHC6 1331 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 SIGLEC16A6NMB1 481 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 RAD51BO15315 384 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 FAM189A1O60320 539 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 GGPS1O95749 300 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 SHBGP04278 402 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 KRT5P13647 590 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 HOXB1P14653 301 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 AXLP30530 894 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 PPARGP37231 505 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 ACOT2P49753 483 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 RPS3AP61247 264 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 MAGOHP61326 146 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 CHRNEQ04844 493 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 HIC1Q14526 733 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 CCNG2Q16589 344 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF568Q3ZCX4 644 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 KCNT1Q5JUK3 1230 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 RBM20Q5T481 1227 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 RNASEH2BQ5TBB1 312 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 PXDC1Q5TGL8 231 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 NIPAL1Q6NVV3 410 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 CCDC137Q6PK04 289 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 DLK2Q6UY11 383 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 ENOSF1Q7L5Y1 443 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 KCTD20Q7Z5Y7 419 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 LRRC34Q8IZ02 419 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 MCOLN2Q8IZK6 566 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 RIN3Q8TB24 985 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 MAGOHBQ96A72 148 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 PITHD1Q9GZP4 211 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 R3HDMLQ9H3Y0 253 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 PIF1Q9H611 641 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 ETNK1Q9HBU6 452 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 SNX24Q9Y343 169 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 PLXNA1Q9UIW2 1896 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 GSTTP1A0A1W2PQM5 241 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 NUDT17P0C025 328 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 HSMCR30P0CW71 290 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 MTHFD1P11586 935 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 SFTPCP11686 197 aa7.66□□□□□ -1.18
PDLIM5-219ENST00000514743 UBA1P22314 1058 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms