RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 LAYNQ6UX15 382 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 GBP6Q6ZN66 633 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 BEND5Q7L4P6 421 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 TMEM110Q86TL2 294 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 IRF2BP1Q8IU81 584 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 ZNF557Q8N988 423 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 C1orf216Q8TAB5 229 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 GATA6Q92908 595 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 TTC17Q96AE7 1141 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 SERGEFQ9UGK8 458 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 FNDC3AQ9Y2H6 1198 aaKnown RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-206ENST00000514611 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
PFDN1-206ENST00000514611 CACNA1BQ00975 2339 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 SYNJ2BP-COX16A0A087WUM0 186 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 SEMA4FO95754 770 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 TACR2P21452 398 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
PFDN1-206ENST00000514611 EXOC3L4Q17RC7 722 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-206ENST00000514611 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-206ENST00000514611 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
PFDN1-206ENST00000514611 SHC3Q92529 594 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 BIRC7Q96CA5 298 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 CPXM1Q96SM3 734 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 BTBD1Q9H0C5 482 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 GAREM1Q9H706 876 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 FAM204AQ9H8W3 233 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 FBRSQ9HAH7 460 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 SIX2Q9NPC8 291 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 COX16Q9P0S2 106 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
PFDN1-206ENST00000514611 USP24Q9UPU5 2620 aa13.77□□□□□ -0.2
PFDN1-206ENST00000514611 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 H0Y626 953 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 GRAP2O75791 330 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 FSBPO95073 299 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 ASLP04424 464 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 PON1P27169 355 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 PI4KAP42356 2102 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 CSNK1EP49674 416 aaKnown RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 STK19P49842 368 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 ZBTB16Q05516 673 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 SLC14A1Q13336 389 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 EIF4EBP2Q13542 120 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 HNRNPA1L2Q32P51 320 aaKnown RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 FAM183BPQ6ZVS7 135 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 DEFB106AQ8N104 65 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 BTN2A3PQ96KV6 586 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 SLC2A13Q96QE2 648 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 RSPH9Q9H1X1 276 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 PABPC3Q9H361 631 aaKnown RBP13.77□□□□□ -0.21
PFDN1-206ENST00000514611 TM9SF3Q9HD45 589 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 FREM2Q5SZK8 3169 aa13.77□□□□□ -0.21
PFDN1-206ENST00000514611 A0A1W2PP55 124 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 FAM170AA1A519 330 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 F5H5T6 163 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 MID1O15344 667 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 CER1O95813 267 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 ERBB2P04626 1255 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 GGCXP38435 758 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 MATKP42679 507 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 AFF3P51826 1226 aaKnown RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 CENPCQ03188 943 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 TRIP6Q15654 476 aaKnown RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 HLA-BQ31612 363 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 DPCR1Q3MIW9 517 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 C9orf64Q5T6V5 341 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 SLC47A2Q86VL8 602 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 MMAAQ8IVH4 418 aaKnown RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 CCDC117Q8IWD4 279 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PNPLA1Q8N8W4 532 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PPP1R13BQ96KQ4 1090 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 RPL10LQ96L21 214 aaKnown RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PRMT1Q99873 361 aaKnown RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 ORAI3Q9BRQ5 295 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms