RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 GPR142Q7Z601 462 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 GIPC2Q8TF65 315 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 GAD1Q99259 594 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 PDGFDQ9GZP0 370 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-213ENST00000514442 EBF3Q9H4W6 596 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
TCOF1-213ENST00000514442 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 MAP3K13O43283 966 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 JCHAINP01591 159 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SERPINB5P36952 375 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 INPP1P49441 399 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SLC25A3Q00325 362 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 COQ7Q99807 217 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 EML4Q9HC35 981 aaKnown RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CASS4Q9NQ75 786 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PIH1D1Q9NWS0 290 aaKnown RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TMEM59LQ9UK28 342 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CDYLQ9Y232 598 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 AP4B1Q9Y6B7 739 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 E5RJQ4 531 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 F5H5T6 163 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SLC11A2P49281 568 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 IRF2BP2Q7Z5L9 587 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PLD3Q8IV08 490 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 FAM136AQ96C01 138 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 COPS7BQ9H9Q2 264 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PHLPP1O60346 1717 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SUPT3HB4E1H0 165 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 H7C4K7 107 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ASNA1O43681 348 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TM7SF2O76062 418 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ABL2P42684 1182 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CCR3P51677 355 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 DEFA1P59665 94 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 DEFA3P59666 94 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZNF177Q13360 481 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 NCCRP1Q6ZVX7 275 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 LNX1Q8TBB1 728 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TSPAN17Q96FV3 270 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 C1orf50Q9BV19 199 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 C6orf203Q9P0P8 240 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SHOC2Q9UQ13 582 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 F8VP50 259 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PDLIM1O00151 329 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 MAFO75444 373 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 F9P00740 461 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 SLC2A3P11169 496 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 GNAZP19086 355 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 JAK1P23458 1154 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CCDC153Q494R4 210 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 GALNTL6Q49A17 601 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 CCDC103Q8IW40 242 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 OSBPL6Q9BZF3 934 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TBX10O75333 385 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 FBXO21O94952 628 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 ZBTB49Q6ZSB9 765 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 TMEM134Q9H6X4 195 aa13.43□□□□□ -0.26
TCOF1-213ENST00000514442 NFASCO94856 1347 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TGFB1I1O43294 461 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 ANXA9O76027 345 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CKMP06732 381 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 SMIM10L2AP0DMW4 78 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 SMIM10L2BP0DMW5 78 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 SYTL3Q4VX76 610 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TRAF7Q6Q0C0 670 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 VSTM1Q6UX27 236 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 OR5B17Q8NGF7 314 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 APBB2Q92870 758 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 DSEQ9UL01 958 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CAB39Q9Y376 341 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 PTRHD1Q6GMV3 140 aaKnown RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 C4orf22Q6V702 233 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 PACS1Q6VY07 963 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CNDP1Q96KN2 507 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 LGALS13Q9UHV8 139 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CCNE2O96020 404 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TTKP33981 857 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 TRAF2Q12933 501 aa13.42□□□□□ -0.26
TCOF1-213ENST00000514442 CDC16Q13042 620 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms