RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CCNYQ8ND76 341 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 HERVK_113Q902F9 699 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 HDAC11Q96DB2 347 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 TBC1D31Q96DN5 1066 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA6AQ9NYA3 693 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 SLC12A8A0AV02 714 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 LCHNA4D1U4 455 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 EIF3HO15372 352 aaKnown RBP eCLIP13.21□□□□□ -0.33e-12■■■■■ 53.6
PVT1-203ENST00000513868 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 SERPINB6P35237 376 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 GARSP41250 739 aaKnown RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 TUBP50607 506 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 IRAK1P51617 712 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 ARL4CP56559 192 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 SEMA5AQ13591 1074 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 KRT71Q3SY84 523 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 AFMIDQ63HM1 303 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 CCDC13Q8IYE1 715 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 ZBED8Q8IZ13 594 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 ZNF567Q8N184 647 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 AGGF1Q8N302 714 aaeCLIP13.21□□□□□ -0.38e-7■■■■□ 20.8
PVT1-203ENST00000513868 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 EPS8L3Q8TE67 593 aaKnown RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 PRMT1Q99873 361 aaKnown RBP13.21□□□□□ -0.3
PVT1-203ENST00000513868 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 CEP41Q9BYV8 373 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 BRD8Q9H0E9 1235 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.21□□□□□ -0.3
PVT1-203ENST00000513868 MPP6Q9NZW5 540 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.3
PVT1-203ENST00000513868 CHD9Q3L8U1 2897 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 HMGB1P1B2RPK0 211 aaPredicted RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 KCNK1O00180 336 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 CLUHO75153 1309 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 APOEP02649 317 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ABHD2P08910 425 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 SYN1P17600 705 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 PTPN3P26045 913 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 MYO7AQ13402 2215 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 AUHQ13825 339 aaKnown RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 AGBL2Q5U5Z8 902 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ARHGEF18Q6ZSZ5 1173 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ZNF534Q76KX8 674 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 TMEM150AQ86TG1 271 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 CAND1Q86VP6 1230 aaKnown RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 NLRP14Q86W24 1093 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 ATP6V0D2Q8N8Y2 350 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 BTN2A3PQ96KV6 586 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 RAD9AQ99638 391 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 STK39Q9UEW8 545 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 VANGL2Q9ULK5 521 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 HBS1LQ9Y450 684 aaKnown RBP13.2□□□□□ -0.3
PVT1-203ENST00000513868 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
PVT1-203ENST00000513868 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 PRRG1O14668 218 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 COCHO43405 550 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 OPHN1O60890 802 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 AVILO75366 819 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 TCEA3O75764 348 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 APRTP07741 180 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 HMBSP08397 361 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 TPSB2P20231 275 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 MX2P20592 715 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
PVT1-203ENST00000513868 KCNQ1P51787 676 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 GPX6P59796 221 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 TWF1Q12792 350 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 MTM1Q13496 603 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 TPSAB1Q15661 275 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 NADSYN1Q6IA69 706 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 KLHDC10Q6PID8 442 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 ARHGAP36Q6ZRI8 547 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
PVT1-203ENST00000513868 ANKMY2Q8IV38 441 aa13.19□□□□□ -0.3
PVT1-203ENST00000513868 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms