RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 CCDC126Q96EE4 140 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 DEFB129Q9H1M3 183 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CNTNAP2Q9UHC6 1331 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 ERI2A8K979 691 aaKnown RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 BIRC5O15392 142 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 SIN3BO75182 1162 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 RTN3O95197 1032 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CD4P01730 458 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CETPP11597 493 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 PIK3R1P27986 724 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 POU4F1Q01851 419 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 BFSP2Q13515 415 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 P3H2Q8IVL5 708 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 DHRSXQ8N5I4 330 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 SAMD3Q8N6K7 520 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 URGCPQ8TCY9 931 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 RNF145Q96MT1 663 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 IDI2Q9BXS1 227 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 DGCR6LQ9BY27 220 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CAB39LQ9H9S4 337 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 ARHGEF9O43307 516 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MTA2O94776 668 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 TSHRP16473 764 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 ZNF143P52747 638 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 PSME3P61289 254 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 ZNF470Q6ECI4 717 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 BNIPLQ7Z465 357 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 TDRPQ86YL5 185 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MYO1HQ8N1T3 1032 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 BANPQ8N9N5 519 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CERS2Q96G23 380 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 NPAS2Q99743 824 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 RIC8BQ9NVN3 520 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 DMAC2Q9NW81 257 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MAP3K20Q9NYL2 800 aaKnown RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 RNF112Q9ULX5 631 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 TGDSO95455 350 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 PGK2P07205 417 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CHRM3P20309 590 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 NR2C2P49116 596 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 LY6KQ17RY6 165 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 PTPN20Q4JDL3 420 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 SAMD4BQ5PRF9 694 aaKnown RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 STK32CQ86UX6 486 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 C12orf56Q8IXR9 622 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GLIS1Q8NBF1 620 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MAGEE2Q8TD90 523 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GIPC3Q8TF64 312 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 LGMNQ99538 433 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 AAR2Q9Y312 384 aaKnown RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 C19orf81C9J6K1 198 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PSMD12O00232 456 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 MYL4P12829 197 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 CCDC130P13994 396 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 CDH2P19022 906 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 TSPAN8P19075 237 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 NRLP54845 237 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 ADIGQ0VDE8 80 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PPM1JQ5JR12 505 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 GPR107Q5VW38 600 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 FAM228AQ86W67 206 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 EBF4Q9BQW3 602 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 CHD2O14647 1828 aaKnown RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 HOXD13P35453 343 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 CD151P48509 253 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 TAF6P49848 677 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 TGFB2P61812 414 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 ZIK1Q3SY52 487 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 SV2CQ496J9 727 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 TAF2Q6P1X5 1199 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 BSNDQ8WZ55 320 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 EDEM1Q92611 657 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 NKD2Q969F2 451 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 APOL5Q9BWW9 433 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 CATSPERBQ9H7T0 1116 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 POLR1BQ9H9Y6 1135 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 SNX15Q9NRS6 342 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PIM2Q9P1W9 311 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PSMD13Q9UNM6 376 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 DMTF1Q9Y222 760 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 GNEQ9Y223 722 aaKnown RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 NDUFAF1Q9Y375 327 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 LTN1O94822 1766 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 ZSCAN9O15535 394 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-209ENST00000513761 LDLRP01130 860 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 GEMP55040 296 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 KLF10Q13118 480 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 PACS1Q6VY07 963 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 HORMAD1Q86X24 394 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 ERO1BQ86YB8 467 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 SLC41A1Q8IVJ1 513 aa7.91□□□□□ -1.14
CLCN3-209ENST00000513761 DEFB106AQ8N104 65 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms