RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 CFAP57Q96MR6 1250 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 WDCPQ9H6R7 721 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 PARD6AQ9NPB6 346 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 TAS2R14Q9NYV8 317 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 SLC12A6Q9UHW9 1150 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 MBD1Q9UIS9 605 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 STAP1Q9ULZ2 295 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CAPN11Q9UMQ6 739 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 TCRBV21S2A2A0A5A6 115 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 DCLK1O15075 740 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 ALDH1A2O94788 518 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 EPN2O95208 641 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 MOCS2O96007 188 aaPredicted RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 SERPINC1P01008 464 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 IGLV3-19P01714 112 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 CALB1P05937 261 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 GZMAP12544 262 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 PRKCHP24723 683 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 HNRNPH3P31942 346 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 WASP42768 502 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 NSFP46459 744 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 IRAK1P51617 712 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 COPAP53621 1224 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 NRG1Q02297 640 aaPredicted RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 ARID5AQ03989 594 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 DEUP1Q05D60 604 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 NME3Q13232 169 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 SLC12A1Q13621 1099 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 USP39Q53GS9 565 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 RAB6CQ53S08 254 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 SH3PXD2AQ5TCZ1 1133 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 MANEALQ5VSG8 457 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 TTC39BQ5VTQ0 682 aaPredicted RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 MBLAC2Q68D91 279 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 PLEKHA7Q6IQ23 1121 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 CHST9Q7L1S5 443 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 STRADAQ7RTN6 431 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 C11orf74Q86VG3 221 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 MFN1Q8IWA4 741 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 LGI2Q8N0V4 545 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 EMC1Q8N766 993 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 OR52K2Q8NGK3 314 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 UCMAQ8WVF2 138 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 RXFP2Q8WXD0 754 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
RNF4-221ENST00000513643 TKTL2Q9H0I9 626 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 RAB6CQ9H0N0 254 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 HAUS4Q9H6D7 363 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
RNF4-221ENST00000513643 CKAP5Q14008 2032 aa10.02□□□□□ -0.8
RNF4-221ENST00000513643 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 TCAF2A6NFQ2 919 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 F5H5T6 163 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 GJB6O95452 261 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 KRT3P12035 628 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PDGFRAP16234 1089 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 NDUFV2P19404 249 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 BCKDHBP21953 392 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 RDXP35241 583 aaKnown RBP10.02□□□□□ -0.81
RNF4-221ENST00000513643 ADRA1BP35368 520 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 SULT1E1P49888 294 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 HDAC4P56524 1084 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 TPM4P67936 248 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PLEKHG6Q3KR16 790 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PITRM1Q5JRX3 1037 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 SFMBT2Q5VUG0 894 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PMS2CLQ68D20 193 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 SDE2Q6IQ49 451 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 CHSY1Q86X52 802 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 APCDD1Q8J025 514 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 GPR161Q8N6U8 529 aaKnown RBP10.02□□□□□ -0.81
RNF4-221ENST00000513643 FRMD1Q8N878 549 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 TPSD1Q9BZJ3 242 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 CIPCQ9C0C6 399 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 ISCUQ9H1K1 167 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 ITM2CQ9NQX7 267 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 METTL5Q9NRN9 209 aaKnown RBP10.02□□□□□ -0.81
RNF4-221ENST00000513643 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 IFNKQ9P0W0 207 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 KIAA1522Q9P206 1035 aaPredicted RBP10.02□□□□□ -0.81
RNF4-221ENST00000513643 STIM2Q9P246 746 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 USP36Q9P275 1121 aaKnown RBP10.02□□□□□ -0.81
RNF4-221ENST00000513643 NENFQ9UMX5 172 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms