RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PDLIM4P50479 330 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 LTBQ06643 244 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 NSUN2Q08J23 767 aaKnown RBP eCLIP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 AAK1Q2M2I8 961 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 SLC35G1Q2M3R5 365 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 GLE1Q53GS7 698 aaKnown RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ZNF324BQ6AW86 544 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ISM2Q6H9L7 571 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 SLC39A5Q6ZMH5 540 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 C18orf65Q6ZTR6 163 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 PAQR4Q8N4S7 273 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 IQCF1Q8N6M8 205 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 FAM47BQ8NA70 645 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 LMO3Q8TAP4 145 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 PARD3BQ8TEW8 1205 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 PAAF1Q9BRP4 392 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 SARGQ9BW04 601 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 OSBPL5Q9H0X9 879 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 RBM38Q9H0Z9 239 aaKnown RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ZNF304Q9HCX3 659 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 TXNRD2Q9NNW7 524 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 STARD7Q9NQZ5 370 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 IGSF9Q9P2J2 1179 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 RAB21Q9UL25 225 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 SLC12A4Q9UP95 1085 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 DOCK7Q96N67 2140 aa2.59□□□□□ -2
PDGFC-208ENST00000512711 GXYLT2A0PJZ3 443 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 FOXO6A8MYZ6 492 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 INAFM1C9JVW0 142 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 I6L893 689 aaPredicted RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 PCDH17O14917 1159 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 NKX2-8O15522 239 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 NEURL1O76050 574 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 PARNO95453 639 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 ANXA6P08133 673 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 TGM2P21980 687 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 EEF1GP26641 437 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 CDC25AP30304 524 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 MLH1P40692 756 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 PMS2P54278 862 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 POLE2P56282 527 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 FAM3BP58499 235 aaPredicted RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 RPL15P61313 204 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 ABATP80404 500 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 SAFBQ15424 915 aaKnown RBP eCLIP2.58□□□□□ -2
PDGFC-208ENST00000512711 RAB30Q15771 203 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 SLC4A8Q2Y0W8 1093 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 ENTPD8Q5MY95 495 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 ANKRD40Q6AI12 368 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 SLC16A12Q6ZSM3 486 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 Q6ZTC4 211 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 RTL10Q7L3V2 364 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 TRAPPC11Q7Z392 1133 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 MDGA2Q7Z553 956 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 RBM23Q86U06 439 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 SPATA2LQ8IUW3 424 aaPredicted RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 ADHFE1Q8IWW8 467 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 FBXL14Q8N1E6 418 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 PRR26Q8N8Z3 221 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 SRFBP1Q8NEF9 429 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 C7orf57Q8NEG2 295 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 CLEC4CQ8WTT0 213 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 BRI3BPQ8WY22 251 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 CENPIQ92674 756 aaPredicted RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 ATP2A3Q93084 1043 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 ZNF566Q969W8 418 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 ADAD1Q96M93 576 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 RIPOR3Q96MK2 946 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 PPP1R10Q96QC0 940 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 HTATIP2Q9BUP3 242 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 MECRQ9BV79 373 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 POLDIP3Q9BY77 421 aaKnown RBP2.58□□□□□ -2
PDGFC-208ENST00000512711 ERVK-5Q9HDB9 667 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 KCNK9Q9NPC2 374 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 PTGDR2Q9Y5Y4 395 aa2.58□□□□□ -2
PDGFC-208ENST00000512711 KIF28PB7ZC32 967 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 PODXLO00592 558 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 PIP5K1BO14986 540 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 MDM4O15151 490 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 SPTLC2O15270 562 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 RPP40O75818 363 aaKnown RBP2.57□□□□□ -2
PDGFC-208ENST00000512711 IDEP14735 1019 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 IGFBP2P18065 325 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 RFX2P48378 723 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 HSPA7P48741 367 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 ZBTB16Q05516 673 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 PMPCAQ10713 525 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 IFIT5Q13325 482 aaKnown RBP2.57□□□□□ -2
PDGFC-208ENST00000512711 CSHL1Q14406 222 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 NFATC4Q14934 902 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 ASIC2Q16515 512 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 DGKKQ5KSL6 1271 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 Q5PR19 223 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 WDR93Q6P2C0 686 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 LRIG3Q6UXM1 1119 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 Q6ZTK2 550 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 ANKRD13AQ8IZ07 590 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 ENGASEQ8NFI3 743 aa2.57□□□□□ -2
PDGFC-208ENST00000512711 PJA1Q8NG27 643 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms