RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 NOS2P35228 1153 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 NPY2RP49146 381 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 BNIP1Q12981 228 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 DMC1Q14565 340 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 FAM182AQ5T1J6 154 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
NEK1-208ENST00000512193 CMC1Q7Z7K0 106 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 RIOX2Q8IUF8 465 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 CYP4X1Q8N118 509 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 CPT1BQ92523 772 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 SH3KBP1Q96B97 665 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 CDCA5Q96FF9 252 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 SENP8Q96LD8 212 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 MBOAT7Q96N66 472 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 PGLYRP2Q96PD5 576 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 TMEM79Q9BSE2 394 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 NMUR2Q9GZQ4 415 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 POPDC2Q9HBU9 364 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 DDX18Q9NVP1 670 aaKnown RBP8.23□□□□□ -1.09
NEK1-208ENST00000512193 CRLS1Q9UJA2 301 aa8.23□□□□□ -1.09
NEK1-208ENST00000512193 PEX1O43933 1283 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 VPS26AO75436 327 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 GLP2RO95838 553 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CDKN2BP42772 138 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 FASTKQ14296 549 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 LACTB2Q53H82 288 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 DCAF12L1Q5VU92 463 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 EFL1Q7Z2Z2 1120 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 PSTKQ8IV42 348 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 HS6ST3Q8IZP7 471 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 TAGAPQ8N103 731 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 SEPHS2Q99611 448 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 TMEM109Q9BVC6 243 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 XPNPEP1Q9NQW7 623 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ZDHHC18Q9NUE0 388 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 WWOXQ9NZC7 414 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 OR12D3Q9UGF7 316 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 TRHDEQ9UKU6 1024 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 PRR5-ARHGAP8B1AHC4 643 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 M0R3G1 203 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 MRASO14807 208 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 PLSCR1O15162 318 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 GPR182O15218 404 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 INPP4BO15327 924 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 BUD23O43709 281 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 PLA2G6O60733 806 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ARF4P18085 180 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 CDK7P50613 346 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ARHGAP8P85298 464 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 GBE1Q04446 702 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ZNF177Q13360 481 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 TBCELQ5QJ74 424 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 OTUD3Q5T2D3 398 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 NEPROQ6NW34 567 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CCDC81Q6ZN84 652 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 NT5DC4Q86YG4 428 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 APLFQ8IW19 511 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 SNX31Q8N9S9 440 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 DDI1Q8WTU0 396 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 NKD2Q969F2 451 aaPredicted RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 DTNBP1Q96EV8 351 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 PRPF18Q99633 342 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 OMDQ99983 421 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 BRD8Q9H0E9 1235 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 LRMDAQ9H2I8 198 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 DNAJC5Q9H3Z4 198 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ST6GALNAC4Q9H4F1 302 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 APOBEC3GQ9HC16 384 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 PCDH18Q9HCL0 1135 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 FAM53CQ9NYF3 392 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CROTQ9UKG9 612 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CRYL1Q9Y2S2 319 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 KIF1AQ12756 1690 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 FMN2Q9NZ56 1722 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ADGRA3Q8IWK6 1321 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 EVPLLA8MZ36 301 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 F5H5T6 163 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 TPBGLP0DKB5 382 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 PTPN1P18031 435 aaKnown RBP8.22□□□□□ -1.09
NEK1-208ENST00000512193 ERCC2P18074 760 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 CHRNB3Q05901 458 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 USP4Q13107 963 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 FNBP1LQ5T0N5 605 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 TFAP2BQ92481 460 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 ABHD16BQ9H3Z7 469 aa8.22□□□□□ -1.09
NEK1-208ENST00000512193 PDHXO00330 501 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 USP1O94782 785 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 ITGA2BP08514 1039 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 FAM58BPP0C7Q3 252 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 NFKB1P19838 968 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 HOXD13P35453 343 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 RENBPP51606 427 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 GTF2A2P52657 109 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 NRF1Q16656 503 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 CTXN3Q4LDR2 81 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 MOB2Q70IA6 237 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 GPR141Q7Z602 305 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms