RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CWF19L1Q69YN2 538 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CATSPERGQ6ZRH7 1159 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FKBP9P1Q75LS8 142 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRPF39Q86UA1 669 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PIGZQ86VD9 579 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMPRSS6Q8IU80 811 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FIBCD1Q8N539 461 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NEDD1Q8NHV4 660 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNF34Q969K3 372 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RFT1Q96AA3 541 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC58Q96CX6 371 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 DTNBP1Q96EV8 351 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPS6KC1Q96S38 1066 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SENP7Q9BQF6 1050 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RTP3Q9BQQ7 232 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NOC4LQ9BVI4 516 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC3Q9BY71 257 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRTAP4-8Q9BYQ9 185 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPL46Q9H2W6 279 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 POPDC2Q9HBU9 364 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SYTL2Q9HCH5 934 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 C6orf50Q9HD87 102 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SSU72Q9NP77 194 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEPT3Q9UH03 358 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHMP2BQ9UQN3 213 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HYOU1Q9Y4L1 999 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 A0A087WV48 116 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SMCO3A2RU48 225 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGAP42A6NI28 874 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 AGAP14A8MT82 685 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CXorf49A8MYA2 514 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP5J2-PTCD1G3V325 749 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 K7ENM7 598 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAPN9O14815 690 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RASGRF2O14827 1237 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 YY2O15391 372 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SGTAO43765 313 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HYAL3O43820 417 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SUN1O94901 812 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABLIM3O94929 683 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP3K6O95382 1288 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERPINC1P01008 464 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PENKP01210 267 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CALCAP01258 141 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT7P08729 469 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 IFIT1P09914 478 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 FGF3P11487 239 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NID1P14543 1247 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SMPD1P17405 629 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 BTCP35070 178 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GRK3P35626 688 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 IGHMBP2P38935 993 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 NNMTP40261 264 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNNI2P48788 182 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARL4DP49703 201 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 COPB1P53618 953 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MECOMQ03112 1051 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADCY1Q08828 1119 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF543Q08ER8 600 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 STRN3Q13033 797 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 DDR2Q16832 855 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRSS53Q2L4Q9 553 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GLE1Q53GS7 698 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTX3Q5HYI7 312 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT77Q7Z794 578 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 METTL3Q86U44 580 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LAS2Q8IYD9 372 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCYL3Q8IZE3 742 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABI1Q8IZP0 508 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 EXD1Q8NHP7 514 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LMBR1Q8WVP7 490 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 CKAP2Q8WWK9 683 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC7A3Q8WY07 619 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSD17B8Q92506 261 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 STAMQ92783 540 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TEKT1Q969V4 418 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R14AQ96A00 147 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MFSD14AQ96MC6 490 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TAPBPLQ9BX59 468 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNF41Q9H4P4 317 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 RRAGCQ9HB90 399 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MKNK2Q9HBH9 465 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 TUFT1Q9NNX1 390 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC40A1Q9NP59 571 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 JADE2Q9NQC1 790 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC6A13Q9NSD5 602 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTRF1LQ9UGC7 380 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 WASF2Q9Y6W5 498 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 WNK2Q9Y3S1 2297 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 LOC105371267A0A1B0GV96 52 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 USP17L3A6NCW0 530 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 USP17L4A6NCW7 530 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8JA6NMD2 632 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 GAS2O43903 313 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 KDM1AO60341 852 aa1.71□□□□□ -2.14
TRAPPC13-211ENST00000512009 BUB1BO60566 1050 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms