RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 INTS13Q9NVM9 706 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 PRRC2BQ5JSZ5 2229 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 EPN2O95208 641 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 OTOAQ7RTW8 1153 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PIWIL2Q8TC59 973 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 TMEM109Q9BVC6 243 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MAF1Q9H063 256 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 WDR41Q9HAD4 459 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 INPP4BO15327 924 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 DGKIO75912 1065 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 CYBBP04839 570 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ARHGEF7Q14155 803 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 FAM120BQ96EK7 910 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 GPN1Q9HCN4 374 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 EHD3Q9NZN3 535 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SASH3O75995 380 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 C16orf86Q6ZW13 317 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PACRGLQ8N7B6 248 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 TCP10LQ8TDR4 215 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 AFG1LQ8WV93 481 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MCCC1Q96RQ3 725 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 EMILIN2Q9BXX0 1053 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 KIAA1683Q9H0B3 1180 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 THAP2Q9H0W7 228 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ZNF451Q9Y4E5 1061 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 NFAT5O94916 1531 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 DYRK3O43781 588 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 DNAJB1P25685 340 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ACAP2Q15057 778 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 FBXW8Q8N3Y1 598 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 IL22Q9GZX6 179 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SMURF2Q9HAU4 748 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ZNF609O15014 1411 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SLC22A1O15245 554 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PPP3CCP48454 512 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 POLD3Q15054 466 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 GPRASP2Q96D09 838 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SEMA4AQ9H3S1 761 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MRPL39Q9NYK5 338 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 ST3GAL5Q9UNP4 418 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 VAV1P15498 845 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 ZNF268Q14587 947 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 ATXN7L3BQ96GX2 97 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 DCUN1D5Q9BTE7 237 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 HTATIP2Q9BUP3 242 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CLN6Q9NWW5 311 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 REM1O75628 298 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 ANPEPP15144 967 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 STARP49675 285 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SLC5A9Q2M3M2 681 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 FBXO43Q4G163 708 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 HSF2Q03933 536 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 BHLHB9Q6PI77 547 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PI16Q6UXB8 463 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 MGRN1O60291 552 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 IGKV5-2P06315 115 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 S100A6P06703 90 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PUDPQ08623 228 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 EIF3MQ7L2H7 374 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 UBE2Q1Q7Z7E8 422 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 QRFPRQ96P65 431 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 TSPAN18Q96SJ8 248 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CINPQ9BW66 212 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 TBC1D10BQ4KMP7 808 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 TRIM74Q86UV6 250 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 TRIM73Q86UV7 250 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 COLGALT2Q8IYK4 626 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CACTIN-AS1Q8N1I8 211 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 FBXO25Q8TCJ0 367 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 ZHX1-C8orf76Q96EF9 292 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 TCEA3O75764 348 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SPOCD1Q6ZMY3 1216 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 MNTQ99583 582 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 NEK6Q9HC98 313 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.53□□□□□ -1.044e-7■■■■■ 48
HTT-208ENST00000510626 A0A087X0T9 212 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 A0A1W2PRG6 482 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SNRPB2P08579 225 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 FAM228BP0C875 321 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CYP11B2P19099 503 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 EIF2AK2P19525 551 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 ERLEC1Q96DZ1 483 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 KLHL11Q9NVR0 708 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 BCLAF3A2AJT9 711 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 APOC4-APOC2K7ER74 178 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PSMD12O00232 456 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 GH2P01242 217 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 APOC2P02655 101 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 WDR49Q8IV35 697 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SGF29Q96ES7 293 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 FNDC3AQ9Y2H6 1198 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms