RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 UBE2IP63279 158 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KRT85P78386 507 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 TMPRSS15P98073 1019 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KDSRQ06136 332 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 EXOSC9Q06265 439 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 DDR1Q08345 913 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 AIMP1Q12904 312 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 BFSP1Q12934 665 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 BLMHQ13867 455 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 BMPR2Q13873 1038 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GIT2Q14161 759 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GALNT3Q14435 633 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 AAK1Q2M2I8 961 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SEZ6Q53EL9 994 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 TDRD12Q587J7 1177 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 CFAP157Q5JU67 520 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 RBM20Q5T481 1227 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ANXA8L1Q5VT79 327 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 TBC1D9BQ66K14 1250 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 CENPPQ6IPU0 288 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GATAD2AQ86YP4 633 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 TTC5Q8N0Z6 440 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 CPA6Q8N4T0 437 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 OR2C3Q8N628 320 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 BEND2Q8NDZ0 799 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 LPCAT1Q8NF37 534 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ENKURQ8TC29 256 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ASB12Q8WXK4 309 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KRT35Q92764 455 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 COPS5Q92905 334 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 PEX13Q92968 403 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GTF3C6Q969F1 213 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SGF29Q96ES7 293 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 MSANTD3Q96H12 275 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 C7orf34Q96L11 122 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ALS2CR12Q96Q35 445 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 NR1H4Q96RI1 486 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SIN3AQ96ST3 1273 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 LLPHQ9BRT6 129 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 DHRS4Q9BTZ2 278 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 MXD3Q9BW11 206 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ZCWPW1Q9H0M4 648 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 OR10A4Q9H209 315 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 LY9Q9HBG7 655 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GPRC5CQ9NQ84 441 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 RPRD1BQ9NQG5 326 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ITM2CQ9NQX7 267 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 C8orf4Q9NR00 106 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 FARSBQ9NSD9 589 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 GDAP2Q9NXN4 497 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SUCLA2Q9P2R7 463 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 MYOTQ9UBF9 498 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 CDC23Q9UJX2 597 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 PSME2Q9UL46 239 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 INSL6Q9Y581 213 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 PCDHGA1Q9Y5H4 931 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KTN1Q86UP2 1357 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 CCDC7Q96M83 1385 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 ADGRL2O95490 1459 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KDM5CP41229 1560 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KDM6BO15054 1643 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 LAMC1P11047 1609 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 DAPK1P53355 1430 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 SMG6Q86US8 1419 aaKnown RBP4.72□□□□□ -1.65
NIPBL-206ENST00000509429 NCOA3Q9Y6Q9 1424 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 KIF7Q2M1P5 1343 aa4.72□□□□□ -1.65
NIPBL-206ENST00000509429 DENND4BO75064 1496 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 RALGAPBQ86X10 1494 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PMS2P1A4D2B8 440 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 FAM83GA6ND36 823 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 GOLGA6L9A6NEM1 432 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 F8W810 466 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 H3BQV1 296 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 FZD9O00144 591 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PSMD14O00487 310 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 NCK2O43639 380 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 RNF8O76064 485 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SLU7O95391 586 aaKnown RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PENKP01210 267 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 HLA-DRAP01903 254 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 KRT14P02533 472 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 ALOX5P09917 674 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 DHRS4L1P0CG22 281 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 MYL4P12829 197 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 KCNA5P22460 613 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 CNTFP26441 200 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 CDC25CP30307 473 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 STARD6P59095 220 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TAP1Q03518 808 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PRKCZQ05513 592 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 C17orf67Q0P5P2 114 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 CBX3Q13185 183 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 ITGA7Q13683 1181 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 COTL1Q14019 142 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 KRT32Q14532 448 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 EFTUD2Q15029 972 aaKnown RBP eCLIP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms