RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DGKGP49619 791 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CLCN6P51797 869 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 COPS2P61201 443 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SEMA3BQ13214 749 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF177Q13360 481 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CDH18Q13634 790 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 AUHQ13825 339 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF528Q3MIS6 628 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 PARP15Q460N3 678 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 HS1BP3Q53T59 392 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TPRG1Q6ZUI0 275 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 BZW1Q7L1Q6 419 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 KIAA1328Q86T90 577 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF683Q8IZ20 524 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SIX5Q8N196 739 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SPEM1Q8N4L4 309 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CAMKK1Q8N5S9 505 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 JOSD2Q8TAC2 188 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 DDI1Q8WTU0 396 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 RSAD2Q8WXG1 361 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TBC1D31Q96DN5 1066 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF670Q9BS34 389 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZYG11BQ9C0D3 744 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 BRD8Q9H0E9 1235 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 MAGEH1Q9H213 219 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM248Q9NWD8 314 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 GTSE1Q9NYZ3 720 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 MYO1AQ9UBC5 1043 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TPX2Q9ULW0 747 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 FZD10Q9ULW2 581 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SLC8A2Q9UPR5 921 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SIT1Q9Y3P8 196 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CACNA1IQ9P0X4 2223 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 COL4A3Q01955 1670 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 PLXND1Q9Y4D7 1925 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 E9PAM4 449 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 NEDD8-MDP1E9PL57 170 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 H3BRJ5 948 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TULP3O75386 442 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 KAT7O95251 611 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 IRF1P10914 325 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 SP100P23497 879 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-205ENST00000506880 MIPP30301 263 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 NNMTP40261 264 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 OPRD1P41143 372 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 CCR3P51677 355 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 NDST2P52849 883 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 NRLP54845 237 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ATP11AP98196 1134 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ENPP2Q13822 863 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 GAB4Q2WGN9 574 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ANO4Q32M45 955 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM31Q5JXX7 168 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 EOGTQ5NDL2 527 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TRNP1Q6NT89 227 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 FBXL22Q6P050 247 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM25Q86YD3 366 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 MFN1Q8IWA4 741 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 RHOT1Q8IXI2 618 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 UMODL1-AS1Q8N2C9 162 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 EMC1Q8N766 993 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 DCAF4L2Q8NA75 395 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 SPC24Q8NBT2 197 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TRIM58Q8NG06 486 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 RIN3Q8TB24 985 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 RPRD1AQ96P16 312 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 C2orf49Q9BVC5 232 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-205ENST00000506880 SMG9Q9H0W8 520 aaKnown RBP8.72□□□□□ -1.01
PDGFC-205ENST00000506880 LINC00597Q9H2U6 94 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 TBC1D17Q9HA65 648 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ARHGEF4Q9NR80 690 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 HEBP1Q9NRV9 189 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 KCND1Q9NSA2 647 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 SPTLC3Q9NUV7 552 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 NUDT5Q9UKK9 219 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 FBXO4Q9UKT5 387 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 AP4E1Q9UPM8 1137 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 HS3ST4Q9Y661 456 aa8.72□□□□□ -1.01
PDGFC-205ENST00000506880 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.01
PDGFC-205ENST00000506880 SPAG17Q6Q759 2223 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 KRBA1A5PL33 1030 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ZBTB24O43167 697 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 NARSO43776 548 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 TUBB4AP04350 444 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 DLDP09622 509 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CISD3P0C7P0 127 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CHRNB1P11230 501 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 PABPC1P11940 636 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ARSAP15289 507 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CNR2P34972 360 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms