RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 FSCBQ5H9T9 825 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 RAP1GAP2Q684P5 730 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 OR6B2Q6IFH4 312 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 NOP9Q86U38 636 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 CHSY1Q86X52 802 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 LGI2Q8N0V4 545 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 DEFB119Q8N690 84 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF366Q8N895 744 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ATP6V0D2Q8N8Y2 350 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 KDM1BQ8NB78 822 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 TMEM35BQ8NCS4 154 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 PRCCQ92733 491 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 FOXJ1Q92949 421 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 NT5C3BQ969T7 300 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 TOE1Q96GM8 510 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 MRGPRX3Q96LB0 322 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 HSPA12BQ96MM6 686 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 NPY6RQ99463 290 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ADAM33Q9BZ11 813 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 FBRSQ9HAH7 460 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 TMEM9BQ9NQ34 198 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 DDIT4Q9NX09 232 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 STIM2Q9P246 746 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 PLA2G4CQ9UP65 541 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 SIK3Q9Y2K2 1263 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 NUMA1Q14980 2115 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 ITIH6Q6UXX5 1313 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 LRRC10BA6NIK2 292 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 PES1O00541 588 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 GRAP2O75791 330 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 LSM8O95777 96 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 ASLP04424 464 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 SERPINF2P08697 491 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 ENGP17813 658 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 POLR2EP19388 210 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 OXTRP30559 389 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CCR1P32246 355 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 NOS2P35228 1153 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CSKP41240 450 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 MATKP42679 507 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 KLK7P49862 253 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 JAM2P57087 298 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 NOMO3P69849 1222 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 ZBTB16Q05516 673 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 MTA1Q13330 715 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CDH18Q13634 790 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 PLEKHG6Q3KR16 790 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 C5orf22Q49AR2 442 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 PITRM1Q5JRX3 1037 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 MMS22LQ6ZRQ5 1243 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 RABEPKQ7Z6M1 372 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CFAP52Q8N1V2 620 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CARNMT1Q8N4J0 409 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CADM4Q8NFZ8 388 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 PGAP3Q96FM1 320 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 VPS16Q9H269 839 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 PRSS16Q9NQE7 514 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 ANO10Q9NW15 660 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 FANCLQ9NW38 375 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 RRN3Q9NYV6 651 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 LIMA1Q9UHB6 759 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 NOCTQ9UK39 431 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
PDLIM5-209ENST00000506632 CHD8Q9HCK8 2581 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 A0A1B0GVM2 712 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 TCAF2A6NFQ2 919 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 METTL12A8MUP2 240 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 F5H5T6 163 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 GOLGA6L22H0YM25 854 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 I6L893 689 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 EPHB6O15197 1021 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 NDUFS2O75306 463 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 KCNK5O95279 499 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 MBD3O95983 291 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SRPRAP08240 638 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 MMEP08473 750 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF18P17022 549 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 TFE3P19532 575 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ABCB4P21439 1286 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 CXCR3P49682 368 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 PLK1P53350 603 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 COPB1P53618 953 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 RPS14P62263 151 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 MYL5Q02045 173 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 NCAPHQ15003 741 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 STX1AQ16623 288 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 HNRNPA1L2Q32P51 320 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ARTNQ5T4W7 220 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms